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sci-biology/samtools: drop 1.20
Signed-off-by: David Seifert <soap@gentoo.org>
This commit is contained in:
@@ -1,2 +1 @@
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DIST samtools-1.20.tar.bz2 9179938 BLAKE2B b534e659899a822e191c779a6ce9247854036da3435a0b63748783edc96d610ff0f02f73bbb5c1eab3ff86dbcca331113f3312a7c3376141ef89b6a8684446e4 SHA512 8526286243d057758cb846311d0a8c728026d31438e87fcc03e0df576f33bcc6da0e18bce141dbdc438a116341c94aa92701cdf10ba6b1301eadedbb34120822
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DIST samtools-1.23.1.tar.bz2 9468164 BLAKE2B dbce77b36525498bb153381179c8978f0dd652dd2a33286817d5b093e51eebe90e7a13590306052da3cc5dd9a2262a9a6866234b02f16194ee5fc1f927ea64af SHA512 c4de14ea17786200daa50b94c41238f1241a852ee0268867d455ae5e2cbe62cd53a7891ce354ecc5a7f6b27d233812a68ce7a64206919722e586e8fe2008229a
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@@ -1,47 +0,0 @@
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# Copyright 1999-2025 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=8
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inherit toolchain-funcs
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DESCRIPTION="Utilities for analysing and manipulating the SAM/BAM alignment formats"
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HOMEPAGE="http://www.htslib.org/"
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SRC_URI="https://github.com/samtools/${PN}/releases/download/${PV}/${P}.tar.bz2"
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LICENSE="MIT"
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SLOT="0"
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KEYWORDS="amd64 ~x86 ~x64-macos"
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RDEPEND="
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dev-lang/perl
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=sci-libs/htslib-$(ver_cut 1-2)*:=
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sys-libs/ncurses:=[unicode(+)]
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virtual/zlib:="
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DEPEND="${RDEPEND}"
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BDEPEND="virtual/pkgconfig"
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src_prepare() {
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default
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# remove bundled htslib
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rm -r htslib-* || die
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}
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src_configure() {
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econf \
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--with-ncurses \
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--with-htslib=system \
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CURSES_LIB="$($(tc-getPKG_CONFIG) --libs ncursesw || die)"
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}
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src_compile() {
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emake AR="$(tc-getAR)"
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}
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src_install() {
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default
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dodoc -r examples
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docompress -x /usr/share/doc/${PF}/examples
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}
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