From b8b4032cb52d9524d363fa33c43a769c777fe8a8 Mon Sep 17 00:00:00 2001 From: David Seifert Date: Sun, 12 Jul 2026 00:41:44 +0200 Subject: [PATCH] sci-biology/samtools: drop 1.20 Signed-off-by: David Seifert --- sci-biology/samtools/Manifest | 1 - sci-biology/samtools/samtools-1.20.ebuild | 47 ----------------------- 2 files changed, 48 deletions(-) delete mode 100644 sci-biology/samtools/samtools-1.20.ebuild diff --git a/sci-biology/samtools/Manifest b/sci-biology/samtools/Manifest index d6d0866c5ea93..1263e2b0918ce 100644 --- a/sci-biology/samtools/Manifest +++ b/sci-biology/samtools/Manifest @@ -1,2 +1 @@ -DIST samtools-1.20.tar.bz2 9179938 BLAKE2B b534e659899a822e191c779a6ce9247854036da3435a0b63748783edc96d610ff0f02f73bbb5c1eab3ff86dbcca331113f3312a7c3376141ef89b6a8684446e4 SHA512 8526286243d057758cb846311d0a8c728026d31438e87fcc03e0df576f33bcc6da0e18bce141dbdc438a116341c94aa92701cdf10ba6b1301eadedbb34120822 DIST samtools-1.23.1.tar.bz2 9468164 BLAKE2B dbce77b36525498bb153381179c8978f0dd652dd2a33286817d5b093e51eebe90e7a13590306052da3cc5dd9a2262a9a6866234b02f16194ee5fc1f927ea64af SHA512 c4de14ea17786200daa50b94c41238f1241a852ee0268867d455ae5e2cbe62cd53a7891ce354ecc5a7f6b27d233812a68ce7a64206919722e586e8fe2008229a diff --git a/sci-biology/samtools/samtools-1.20.ebuild b/sci-biology/samtools/samtools-1.20.ebuild deleted file mode 100644 index a8ef4fe964ffb..0000000000000 --- a/sci-biology/samtools/samtools-1.20.ebuild +++ /dev/null @@ -1,47 +0,0 @@ -# Copyright 1999-2025 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -inherit toolchain-funcs - -DESCRIPTION="Utilities for analysing and manipulating the SAM/BAM alignment formats" -HOMEPAGE="http://www.htslib.org/" -SRC_URI="https://github.com/samtools/${PN}/releases/download/${PV}/${P}.tar.bz2" - -LICENSE="MIT" -SLOT="0" -KEYWORDS="amd64 ~x86 ~x64-macos" - -RDEPEND=" - dev-lang/perl - =sci-libs/htslib-$(ver_cut 1-2)*:= - sys-libs/ncurses:=[unicode(+)] - virtual/zlib:=" -DEPEND="${RDEPEND}" -BDEPEND="virtual/pkgconfig" - -src_prepare() { - default - - # remove bundled htslib - rm -r htslib-* || die -} - -src_configure() { - econf \ - --with-ncurses \ - --with-htslib=system \ - CURSES_LIB="$($(tc-getPKG_CONFIG) --libs ncursesw || die)" -} - -src_compile() { - emake AR="$(tc-getAR)" -} - -src_install() { - default - - dodoc -r examples - docompress -x /usr/share/doc/${PF}/examples -}