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sci-libs/hdf5: drop versions

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Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
This commit is contained in:
Andreas Sturmlechner
2022-12-18 12:27:30 +01:00
parent e1073b9bef
commit 513660bbc8
9 changed files with 0 additions and 867 deletions
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1
sci-libs/hdf5/Manifest
View File

@@ -1,3 +1,2 @@
DIST hdf5-1.10.5.tar.bz2 8706317 BLAKE2B ac326be8fe4ccc4b0153f15bc7d65aa8f1adc2ae279d3980f57ed46722b754d3f36ecf1d6273c75e80ed1afd4bbf10c6b1c5d9408e1f83a4b2e397e7902a7d3c SHA512 769e43b8672e26fe24ed68da0228c010d3d9bc950ca09f0bc60707911a2f26f2f8415c8abc8ec06e07667148d8cdb3b0c7b3e7860d9b19739629c5dfd5ce73d4
DIST hdf5-1.12.1.tar.bz2 9724309 BLAKE2B cc75ba497188b33972218d02a7601acad1a0443bdb934ecd1641ef5996076fe120e3b72dba3a99d99f919fb4e478d1e531414448de9a7b97a0afde58a4c7c23f SHA512 158a067ee284ccb9e2c4db12e9d37cf187d90d9ef1bed7a6303e2c3a2fd216d7b13a46c5f46018b097511281c4246156b6f917633ca88872f10f0ad04be285fd
DIST hdf5-1.12.2.tar.bz2 10494264 BLAKE2B 99ca5b57f6f54fa044c909f0773de62b218c1f0ec3c011f88f3c227536dd719e77ddbe42d562b1214e8843e41d8fc56db499d7f122876fdd36ef31b235229cb7 SHA512 cbb4663570de76b11adb6bf62cfdb754371d31eeab04691479a5764a45207a9c1309665ab80f51c63a4b9b87354f9cbe6835cef506a9fd554d142c6d2bec21e5

103
sci-libs/hdf5/files/hdf5-1.12.1-cmake_installdirs.patch
View File

@@ -1,103 +0,0 @@
--- a/c++/src/CMakeLists.txt
+++ b/c++/src/CMakeLists.txt
@@ -180,8 +180,8 @@
#-----------------------------------------------------------------------------
set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
-set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
-set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
set (_PKG_CONFIG_LIBNAME "${HDF5_CPP_LIB_CORENAME}")
set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -46,6 +46,13 @@
endif()
endif ()
+include (GNUInstallDirs)
+set (HDF5_INSTALL_BIN_DIR "${CMAKE_INSTALL_FULL_BINDIR}")
+set (HDF5_INSTALL_DATA_DIR "${CMAKE_INSTALL_FULL_DATADIR}")
+set (HDF5_INSTALL_DOC_DIR "${CMAKE_INSTALL_FULL_DOCDIR}")
+set (HDF5_INSTALL_INCLUDE_DIR "${CMAKE_INSTALL_FULL_INCLUDEDIR}")
+set (HDF5_INSTALL_LIB_DIR "${CMAKE_INSTALL_FULL_LIBDIR}")
+
#-----------------------------------------------------------------------------
# Instructions for use : Sub-Project Build
#
--- a/fortran/src/CMakeLists.txt
+++ b/fortran/src/CMakeLists.txt
@@ -537,8 +537,8 @@
#-----------------------------------------------------------------------------
set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
-set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
-set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
set (_PKG_CONFIG_LIBNAME "${HDF5_F90_LIB_CORENAME}")
set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
--- a/hl/c++/src/CMakeLists.txt
+++ b/hl/c++/src/CMakeLists.txt
@@ -91,8 +91,8 @@
#-----------------------------------------------------------------------------
set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
-set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
-set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
set (_PKG_CONFIG_LIBNAME "${HDF5_HL_CPP_LIB_CORENAME}")
set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
--- a/hl/fortran/src/CMakeLists.txt
+++ b/hl/fortran/src/CMakeLists.txt
@@ -324,8 +324,8 @@
#-----------------------------------------------------------------------------
set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
-set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
-set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
set (_PKG_CONFIG_LIBNAME "${HDF5_HL_F90_LIB_CORENAME}")
set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
--- a/hl/src/CMakeLists.txt
+++ b/hl/src/CMakeLists.txt
@@ -123,8 +123,8 @@
#-----------------------------------------------------------------------------
set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
-set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
-set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
set (_PKG_CONFIG_LIBNAME "${HDF5_HL_LIB_CORENAME}")
set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
--- a/src/CMakeLists.txt
+++ b/src/CMakeLists.txt
@@ -1311,8 +1311,8 @@
#-----------------------------------------------------------------------------
set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
-set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
-set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
set (_PKG_CONFIG_LIBNAME "${HDF5_LIB_CORENAME}")
set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
@@ -1419,7 +1419,7 @@
# )
install (
DIRECTORY ${HDF5_BINARY_DIR}/hdf5lib_docs/html
- DESTINATION ${HDF5_INSTALL_DATA_DIR}
+ DESTINATION ${HDF5_INSTALL_DOC_DIR}
COMPONENT Documents
)

164
sci-libs/hdf5/files/hdf5-1.12.2-cmake_installdirs.patch
View File

@@ -1,164 +0,0 @@
https://github.com/HDFGroup/hdf5/pull/1716
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -46,6 +46,13 @@ if (CMAKE_VERSION VERSION_LESS "3.14.0")
endif()
endif ()
+include (GNUInstallDirs)
+set (HDF5_INSTALL_BIN_DIR "${CMAKE_INSTALL_FULL_BINDIR}")
+set (HDF5_INSTALL_DATA_DIR "${CMAKE_INSTALL_FULL_DATADIR}")
+set (HDF5_INSTALL_DOC_DIR "${CMAKE_INSTALL_FULL_DOCDIR}")
+set (HDF5_INSTALL_INCLUDE_DIR "${CMAKE_INSTALL_FULL_INCLUDEDIR}")
+set (HDF5_INSTALL_LIB_DIR "${CMAKE_INSTALL_FULL_LIBDIR}")
+
#-----------------------------------------------------------------------------
# Instructions for use : Sub-Project Build
#
--- a/c++/src/CMakeLists.txt
+++ b/c++/src/CMakeLists.txt
@@ -173,8 +173,8 @@ endif ()
#-----------------------------------------------------------------------------
set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
-set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
-set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
set (_PKG_CONFIG_LIBNAME "${HDF5_CPP_LIB_CORENAME}")
set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
--- a/doxygen/CMakeLists.txt
+++ b/doxygen/CMakeLists.txt
@@ -36,7 +36,7 @@ if (DOXYGEN_FOUND)
install (
DIRECTORY ${HDF5_BINARY_DIR}/hdf5lib_docs/html
- DESTINATION ${HDF5_INSTALL_DATA_DIR}
+ DESTINATION ${HDF5_INSTALL_DOC_DIR}
COMPONENT Documents
)
--- a/fortran/src/CMakeLists.txt
+++ b/fortran/src/CMakeLists.txt
@@ -537,8 +537,8 @@ endif ()
#-----------------------------------------------------------------------------
set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
-set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
-set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
set (_PKG_CONFIG_LIBNAME "${HDF5_F90_LIB_CORENAME}")
set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
--- a/hl/c++/src/CMakeLists.txt
+++ b/hl/c++/src/CMakeLists.txt
@@ -91,8 +91,8 @@ endif ()
#-----------------------------------------------------------------------------
set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
-set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
-set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
set (_PKG_CONFIG_LIBNAME "${HDF5_HL_CPP_LIB_CORENAME}")
set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
--- a/hl/fortran/src/CMakeLists.txt
+++ b/hl/fortran/src/CMakeLists.txt
@@ -324,8 +324,8 @@ endif ()
#-----------------------------------------------------------------------------
set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
-set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
-set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
set (_PKG_CONFIG_LIBNAME "${HDF5_HL_F90_LIB_CORENAME}")
set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
--- a/hl/src/CMakeLists.txt
+++ b/hl/src/CMakeLists.txt
@@ -123,8 +123,8 @@ endif ()
#-----------------------------------------------------------------------------
set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
-set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
-set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
set (_PKG_CONFIG_LIBNAME "${HDF5_HL_LIB_CORENAME}")
set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
--- a/src/CMakeLists.txt
+++ b/src/CMakeLists.txt
@@ -1288,8 +1288,8 @@ endif ()
#-----------------------------------------------------------------------------
set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX})
set (_PKG_CONFIG_EXEC_PREFIX \${prefix})
-set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib)
-set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include)
+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR})
+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR})
set (_PKG_CONFIG_LIBNAME "${HDF5_LIB_CORENAME}")
set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}")
--- a/CMakeInstallation.cmake
+++ b/CMakeInstallation.cmake
@@ -31,7 +31,7 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED)
if (HDF5_EXPORTED_TARGETS)
install (
EXPORT ${HDF5_EXPORTED_TARGETS}
- DESTINATION ${HDF5_INSTALL_CMAKE_DIR}
+ DESTINATION ${HDF5_INSTALL_LIB_DIR}/cmake
FILE ${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-targets.cmake
NAMESPACE ${HDF_PACKAGE_NAMESPACE}
COMPONENT configinstall
@@ -67,12 +67,12 @@ set (HDF5_VERSION_MINOR ${HDF5_PACKAGE_VERSION_MINOR})
# Configure the hdf5-config.cmake file for the build directory
#-----------------------------------------------------------------------------
set (INCLUDE_INSTALL_DIR ${HDF5_INSTALL_INCLUDE_DIR})
-set (SHARE_INSTALL_DIR "${CMAKE_CURRENT_BINARY_DIR}/${HDF5_INSTALL_CMAKE_DIR}" )
+set (SHARE_INSTALL_DIR "${CMAKE_CURRENT_BINARY_DIR}/${HDF5_INSTALL_LIB_DIR}/cmake" )
set (CURRENT_BUILD_DIR "${CMAKE_CURRENT_BINARY_DIR}" )
configure_package_config_file (
${HDF_RESOURCES_DIR}/hdf5-config.cmake.in
"${HDF5_BINARY_DIR}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake"
- INSTALL_DESTINATION "${HDF5_INSTALL_CMAKE_DIR}"
+ INSTALL_DESTINATION "${HDF5_INSTALL_LIB_DIR}/cmake"
PATH_VARS INCLUDE_INSTALL_DIR SHARE_INSTALL_DIR CURRENT_BUILD_DIR
INSTALL_PREFIX "${CMAKE_CURRENT_BINARY_DIR}"
)
@@ -81,19 +81,19 @@ configure_package_config_file (
# Configure the hdf5-config.cmake file for the install directory
#-----------------------------------------------------------------------------
set (INCLUDE_INSTALL_DIR ${HDF5_INSTALL_INCLUDE_DIR})
-set (SHARE_INSTALL_DIR "${CMAKE_INSTALL_PREFIX}/${HDF5_INSTALL_CMAKE_DIR}" )
+set (SHARE_INSTALL_DIR "${CMAKE_INSTALL_PREFIX}/${HDF5_INSTALL_LIB_DIR}/cmake" )
set (CURRENT_BUILD_DIR "${CMAKE_INSTALL_PREFIX}" )
configure_package_config_file (
${HDF_RESOURCES_DIR}/hdf5-config.cmake.in
"${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake"
- INSTALL_DESTINATION "${HDF5_INSTALL_CMAKE_DIR}"
+ INSTALL_DESTINATION "${HDF5_INSTALL_LIB_DIR}/cmake"
PATH_VARS INCLUDE_INSTALL_DIR SHARE_INSTALL_DIR CURRENT_BUILD_DIR
)
if (NOT HDF5_EXTERNALLY_CONFIGURED)
install (
FILES ${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake
- DESTINATION ${HDF5_INSTALL_CMAKE_DIR}
+ DESTINATION ${HDF5_INSTALL_LIB_DIR}/cmake
COMPONENT configinstall
)
endif ()
@@ -109,7 +109,7 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED)
)
install (
FILES ${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config-version.cmake
- DESTINATION ${HDF5_INSTALL_CMAKE_DIR}
+ DESTINATION ${HDF5_INSTALL_LIB_DIR}/cmake
COMPONENT configinstall
)
endif ()

102
sci-libs/hdf5/hdf5-1.10.5.ebuild
View File

@@ -1,102 +0,0 @@
# Copyright 1999-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
FORTRAN_NEEDED=fortran
inherit autotools fortran-2 flag-o-matic toolchain-funcs prefix
MY_P=${PN}-${PV/_p/-patch}
MAJOR_P=${PN}-$(ver_cut 1-2)
DESCRIPTION="General purpose library and file format for storing scientific data"
HOMEPAGE="https://www.hdfgroup.org/HDF5/"
SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2"
LICENSE="NCSA-HDF"
SLOT="0/${PV%%_p*}"
KEYWORDS="~alpha amd64 ~arm arm64 ~ia64 ppc ppc64 ~riscv sparc x86 ~amd64-linux ~x86-linux"
IUSE="cxx debug examples fortran +hl mpi szip threads zlib"
REQUIRED_USE="
cxx? ( !mpi ) mpi? ( !cxx )
threads? ( !cxx !mpi !fortran !hl )"
RDEPEND="
mpi? ( virtual/mpi[romio] )
szip? ( virtual/szip )
zlib? ( sys-libs/zlib:0= )"
DEPEND="${RDEPEND}
sys-devel/libtool:2
>=sys-devel/autoconf-2.69"
S="${WORKDIR}/${MY_P}"
PATCHES=(
"${FILESDIR}"/${PN}-1.8.9-static_libgfortran.patch
"${FILESDIR}"/${PN}-1.8.9-mpicxx.patch
"${FILESDIR}"/${PN}-1.8.13-no-messing-ldpath.patch
)
pkg_setup() {
tc-export CXX CC AR # workaround for bug 285148
use fortran && fortran-2_pkg_setup
if use mpi; then
if has_version 'sci-libs/hdf5[-mpi]'; then
ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail."
ewarn "Try to uninstall the current hdf5 prior to enabling mpi support."
fi
export CC=mpicc
use fortran && export FC=mpif90
elif has_version 'sci-libs/hdf5[mpi]'; then
ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail."
ewarn "Try to uninstall the current hdf5 prior to disabling mpi support."
fi
}
src_prepare() {
# respect gentoo examples directory
sed \
-e "s:hdf5_examples:doc/${PF}/examples:g" \
-i $(find . -name Makefile.am) $(find . -name "run*.sh.in") || die
sed \
-e '/docdir/d' \
-i config/commence.am || die
if ! use examples; then
sed -e '/^install:/ s/install-examples//' \
-i Makefile.am || die #409091
fi
# enable shared libs by default for h5cc config utility
sed -i -e "s/SHLIB:-no/SHLIB:-yes/g" tools/src/misc/h5cc.in || die
hprefixify m4/libtool.m4
default
eautomake
}
src_configure() {
use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620
econf \
--disable-static \
--enable-deprecated-symbols \
--enable-build-mode=$(usex debug debug production) \
$(use_enable cxx) \
$(use_enable debug codestack) \
$(use_enable fortran) \
$(use_enable hl) \
$(use_enable mpi parallel) \
$(use_enable threads threadsafe) \
$(use_with szip szlib) \
$(use_with threads pthread) \
$(use_with zlib)
}
src_install() {
default
# no static archives
find "${D}" -name '*.la' -delete || die
}

128
sci-libs/hdf5/hdf5-1.12.1-r1.ebuild
View File

@@ -1,128 +0,0 @@
# Copyright 1999-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
FORTRAN_NEEDED="fortran"
inherit cmake flag-o-matic fortran-2 toolchain-funcs
MY_P="${PN}-${PV/_p/-patch}"
MAJOR_P="${PN}-$(ver_cut 1-2)"
DESCRIPTION="General purpose library and file format for storing scientific data"
HOMEPAGE="https://www.hdfgroup.org/HDF5/"
SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2"
LICENSE="NCSA-HDF"
SLOT="0/${PV%%_p*}"
KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86 ~amd64-linux ~x86-linux"
IUSE="cxx debug doc examples fortran +hl mpi ros3 szip test threads unsupported zlib"
REQUIRED_USE="
!unsupported? (
mpi? ( !cxx !threads )
threads? ( !cxx !fortran !hl )
)"
RESTRICT="!test? ( test )"
RDEPEND="
mpi? ( virtual/mpi[romio] )
ros3? (
net-misc/curl
dev-libs/openssl:=
)
szip? ( virtual/szip )
zlib? ( sys-libs/zlib:0= )
"
DEPEND="${RDEPEND}"
BDEPEND="doc? (
app-doc/doxygen
virtual/latex-base
)"
PATCHES=(
"${FILESDIR}"/${PN}-1.12.1-cmake_installdirs.patch
)
S="${WORKDIR}/${MY_P}"
pkg_setup() {
use fortran && fortran-2_pkg_setup
if use mpi; then
if has_version 'sci-libs/hdf5[-mpi]'; then
ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail."
ewarn "Try to uninstall the current hdf5 prior to enabling mpi support."
fi
export CC="mpicc"
use fortran && export FC="mpif90"
append-libs -lmpi
elif has_version 'sci-libs/hdf5[mpi]'; then
ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail."
ewarn "Try to uninstall the current hdf5 prior to disabling mpi support."
fi
}
src_configure() {
use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620
local mycmakeargs=(
# Workaround needed to allow build with USE=fortran when an older
# version is installed. See bug #808633 and
# https://github.com/HDFGroup/hdf5/issues/1027 upstream.
-DCMAKE_INCLUDE_DIRECTORIES_PROJECT_BEFORE=ON
-DBUILD_STATIC_LIBS=OFF
-DFETCHCONTENT_FULLY_DISCONNECTED=ON
-DHDF5_BUILD_EXAMPLES=OFF
-DALLOW_UNSUPPORTED=$(usex unsupported)
-DBUILD_TESTING=$(usex test)
-DHDF5_BUILD_CPP_LIB=$(usex cxx)
-DHDF5_BUILD_DOC=$(usex doc)
-DHDF5_BUILD_FORTRAN=$(usex fortran)
-DHDF5_BUILD_HL_LIB=$(usex hl)
-DHDF5_ENABLE_CODESTACK=$(usex debug)
-DHDF5_ENABLE_PARALLEL=$(usex mpi)
-DHDF5_ENABLE_SZIP_ENCODING=$(usex szip)
-DHDF5_ENABLE_SZIP_SUPPORT=$(usex szip)
-DHDF5_ENABLE_THREADSAFE=$(usex threads)
-DHDF5_ENABLE_Z_LIB_SUPPORT=$(usex zlib)
-DHDF5_ENABLE_ROS3_VFD:BOOL=$(usex ros3)
)
cmake_src_configure
}
src_install() {
cmake_src_install
# TODO: generate functioning example runners from their respective
# .in files - as of version 1.12.1 upstream only has it implemented
# for autoconf.
if use examples; then
# These are all useless outside the source tree
rm -f {examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
rm -f hl/{examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
dodoc -r examples
if use cxx; then
docinto c++
dodoc -r c++/examples
fi
if use fortran; then
docinto fortran
dodoc -r fortran/examples
fi
if use hl; then
docinto hl
dodoc -r hl/examples
if use cxx; then
docinto hl/c++
dodoc -r hl/c++/examples
fi
if use fortran; then
docinto hl/fortran
dodoc -r hl/fortran/examples
fi
fi
fi
}

119
sci-libs/hdf5/hdf5-1.12.1.ebuild
View File

@@ -1,119 +0,0 @@
# Copyright 1999-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
FORTRAN_NEEDED="fortran"
inherit cmake flag-o-matic fortran-2 toolchain-funcs
MY_P="${PN}-${PV/_p/-patch}"
MAJOR_P="${PN}-$(ver_cut 1-2)"
DESCRIPTION="General purpose library and file format for storing scientific data"
HOMEPAGE="https://www.hdfgroup.org/HDF5/"
SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2"
LICENSE="NCSA-HDF"
SLOT="0/${PV%%_p*}"
KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~ppc ~ppc64 ~riscv ~sparc ~x86 ~amd64-linux ~x86-linux"
IUSE="cxx debug doc examples fortran +hl mpi szip test threads unsupported zlib"
REQUIRED_USE="
!unsupported? (
mpi? ( !cxx !threads )
threads? ( !cxx !fortran !hl )
)"
RESTRICT="!test? ( test )"
RDEPEND="
mpi? ( virtual/mpi[romio] )
szip? ( virtual/szip )
zlib? ( sys-libs/zlib:0= )
"
DEPEND="${RDEPEND}"
BDEPEND="doc? (
app-doc/doxygen
virtual/latex-base
)"
PATCHES=(
"${FILESDIR}"/${PN}-1.12.1-cmake_installdirs.patch
)
S="${WORKDIR}/${MY_P}"
pkg_setup() {
use fortran && fortran-2_pkg_setup
if use mpi; then
if has_version 'sci-libs/hdf5[-mpi]'; then
ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail."
ewarn "Try to uninstall the current hdf5 prior to enabling mpi support."
fi
export CC="mpicc"
use fortran && export FC="mpif90"
append-libs -lmpi
elif has_version 'sci-libs/hdf5[mpi]'; then
ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail."
ewarn "Try to uninstall the current hdf5 prior to disabling mpi support."
fi
}
src_configure() {
use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620
local mycmakeargs=(
-DBUILD_STATIC_LIBS=OFF
-DFETCHCONTENT_FULLY_DISCONNECTED=ON
-DHDF5_BUILD_EXAMPLES=OFF
-DALLOW_UNSUPPORTED=$(usex unsupported)
-DBUILD_TESTING=$(usex test)
-DHDF5_BUILD_CPP_LIB=$(usex cxx)
-DHDF5_BUILD_DOC=$(usex doc)
-DHDF5_BUILD_FORTRAN=$(usex fortran)
-DHDF5_BUILD_HL_LIB=$(usex hl)
-DHDF5_ENABLE_CODESTACK=$(usex debug)
-DHDF5_ENABLE_PARALLEL=$(usex mpi)
-DHDF5_ENABLE_SZIP_ENCODING=$(usex szip)
-DHDF5_ENABLE_SZIP_SUPPORT=$(usex szip)
-DHDF5_ENABLE_THREADSAFE=$(usex threads)
-DHDF5_ENABLE_Z_LIB_SUPPORT=$(usex zlib)
)
cmake_src_configure
}
src_install() {
cmake_src_install
# TODO: generate functioning example runners from their respective
# .in files - as of version 1.12.1 upstream only has it implemented
# for autoconf.
if use examples; then
# These are all useless outside the source tree
rm -f {examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
rm -f hl/{examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
dodoc -r examples
if use cxx; then
docinto c++
dodoc -r c++/examples
fi
if use fortran; then
docinto fortran
dodoc -r fortran/examples
fi
if use hl; then
docinto hl
dodoc -r hl/examples
if use cxx; then
docinto hl/c++
dodoc -r hl/c++/examples
fi
if use fortran; then
docinto hl/fortran
dodoc -r hl/fortran/examples
fi
fi
fi
}

124
sci-libs/hdf5/hdf5-1.12.2-r1.ebuild
View File

@@ -1,124 +0,0 @@
# Copyright 1999-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
FORTRAN_NEEDED="fortran"
inherit cmake flag-o-matic fortran-2 toolchain-funcs
MY_P="${PN}-${PV/_p/-patch}"
MAJOR_P="${PN}-$(ver_cut 1-2)"
DESCRIPTION="General purpose library and file format for storing scientific data"
HOMEPAGE="https://www.hdfgroup.org/HDF5/"
SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2"
LICENSE="NCSA-HDF"
SLOT="0/${PV%%_p*}"
KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~ppc ~ppc64 ~riscv ~sparc ~x86 ~amd64-linux ~x86-linux"
IUSE="cxx debug doc examples fortran +hl mpi szip test threads unsupported zlib"
REQUIRED_USE="
!unsupported? (
mpi? ( !cxx !threads )
threads? ( !cxx !fortran !hl )
)"
RESTRICT="!test? ( test )"
RDEPEND="
mpi? ( virtual/mpi[romio] )
szip? ( virtual/szip )
zlib? ( sys-libs/zlib:0= )
"
DEPEND="${RDEPEND}"
BDEPEND="doc? (
app-doc/doxygen
virtual/latex-base
)"
PATCHES=(
"${FILESDIR}"/${PN}-1.12.2-cmake_installdirs.patch
)
S="${WORKDIR}/${MY_P}"
pkg_setup() {
use fortran && fortran-2_pkg_setup
if use mpi; then
if has_version 'sci-libs/hdf5[-mpi]'; then
ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail."
ewarn "Try to uninstall the current hdf5 prior to enabling mpi support."
fi
export CC="mpicc"
use fortran && export FC="mpif90"
append-libs -lmpi
elif has_version 'sci-libs/hdf5[mpi]'; then
ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail."
ewarn "Try to uninstall the current hdf5 prior to disabling mpi support."
fi
}
src_configure() {
use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620
local mycmakeargs=(
# Workaround needed to allow build with USE=fortran when an older
# version is installed. See bug #808633 and
# https://github.com/HDFGroup/hdf5/issues/1027 upstream.
-DCMAKE_INCLUDE_DIRECTORIES_PROJECT_BEFORE=ON
-DBUILD_STATIC_LIBS=OFF
-DONLY_SHARED_LIBS=ON
-DFETCHCONTENT_FULLY_DISCONNECTED=ON
-DHDF5_BUILD_EXAMPLES=OFF
-DALLOW_UNSUPPORTED=$(usex unsupported)
-DBUILD_TESTING=$(usex test)
-DHDF5_BUILD_CPP_LIB=$(usex cxx)
-DHDF5_BUILD_DOC=$(usex doc)
-DHDF5_BUILD_FORTRAN=$(usex fortran)
-DHDF5_BUILD_HL_LIB=$(usex hl)
-DHDF5_ENABLE_CODESTACK=$(usex debug)
-DHDF5_ENABLE_PARALLEL=$(usex mpi)
-DHDF5_ENABLE_SZIP_ENCODING=$(usex szip)
-DHDF5_ENABLE_SZIP_SUPPORT=$(usex szip)
-DHDF5_ENABLE_THREADSAFE=$(usex threads)
-DHDF5_ENABLE_Z_LIB_SUPPORT=$(usex zlib)
)
cmake_src_configure
}
src_install() {
cmake_src_install
# TODO: generate functioning example runners from their respective
# .in files - as of version 1.12.1 upstream only has it implemented
# for autoconf.
if use examples; then
# These are all useless outside the source tree
rm -f {examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
rm -f hl/{examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
dodoc -r examples
if use cxx; then
docinto c++
dodoc -r c++/examples
fi
if use fortran; then
docinto fortran
dodoc -r fortran/examples
fi
if use hl; then
docinto hl
dodoc -r hl/examples
if use cxx; then
docinto hl/c++
dodoc -r hl/c++/examples
fi
if use fortran; then
docinto hl/fortran
dodoc -r hl/fortran/examples
fi
fi
fi
}

125
sci-libs/hdf5/hdf5-1.12.2-r2.ebuild
View File

@@ -1,125 +0,0 @@
# Copyright 1999-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
FORTRAN_NEEDED="fortran"
inherit cmake flag-o-matic fortran-2 toolchain-funcs
MY_P="${PN}-${PV/_p/-patch}"
MAJOR_P="${PN}-$(ver_cut 1-2)"
DESCRIPTION="General purpose library and file format for storing scientific data"
HOMEPAGE="https://www.hdfgroup.org/HDF5/"
SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2"
LICENSE="NCSA-HDF"
SLOT="0/${PV%%_p*}"
KEYWORDS="~alpha amd64 arm arm64 ~hppa ~ia64 ppc ppc64 ~riscv ~s390 sparc x86 ~amd64-linux ~x86-linux"
IUSE="cxx debug doc examples fortran +hl mpi szip test threads unsupported zlib"
REQUIRED_USE="
!unsupported? (
mpi? ( !cxx !threads )
threads? ( !cxx !fortran !hl )
)"
RESTRICT="!test? ( test )"
RDEPEND="
mpi? ( virtual/mpi[romio] )
szip? ( virtual/szip )
zlib? ( sys-libs/zlib:0= )
"
DEPEND="${RDEPEND}"
BDEPEND="doc? (
app-doc/doxygen
virtual/latex-base
)"
PATCHES=(
"${FILESDIR}"/${PN}-1.12.2-cmake_installdirs.patch
)
S="${WORKDIR}/${MY_P}"
pkg_setup() {
use fortran && fortran-2_pkg_setup
if use mpi; then
if has_version 'sci-libs/hdf5[-mpi]'; then
ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail."
ewarn "Try to uninstall the current hdf5 prior to enabling mpi support."
fi
export CC="mpicc"
use fortran && export FC="mpif90"
append-libs -lmpi
elif has_version 'sci-libs/hdf5[mpi]'; then
ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail."
ewarn "Try to uninstall the current hdf5 prior to disabling mpi support."
fi
}
src_configure() {
use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620
local mycmakeargs=(
# Workaround needed to allow build with USE=fortran when an older
# version is installed. See bug #808633 and
# https://github.com/HDFGroup/hdf5/issues/1027 upstream.
-DCMAKE_INCLUDE_DIRECTORIES_PROJECT_BEFORE=ON
-DBUILD_STATIC_LIBS=OFF
-DONLY_SHARED_LIBS=ON
-DFETCHCONTENT_FULLY_DISCONNECTED=ON
-DHDF5_BUILD_EXAMPLES=OFF
-DH5_DEFAULT_PLUGINDIR="${EPREFIX}/usr/$(get_libdir)/hdf5/plugin"
-DALLOW_UNSUPPORTED=$(usex unsupported)
-DBUILD_TESTING=$(usex test)
-DHDF5_BUILD_CPP_LIB=$(usex cxx)
-DHDF5_BUILD_DOC=$(usex doc)
-DHDF5_BUILD_FORTRAN=$(usex fortran)
-DHDF5_BUILD_HL_LIB=$(usex hl)
-DHDF5_ENABLE_CODESTACK=$(usex debug)
-DHDF5_ENABLE_PARALLEL=$(usex mpi)
-DHDF5_ENABLE_SZIP_ENCODING=$(usex szip)
-DHDF5_ENABLE_SZIP_SUPPORT=$(usex szip)
-DHDF5_ENABLE_THREADSAFE=$(usex threads)
-DHDF5_ENABLE_Z_LIB_SUPPORT=$(usex zlib)
)
cmake_src_configure
}
src_install() {
cmake_src_install
# TODO: generate functioning example runners from their respective
# .in files - as of version 1.12.1 upstream only has it implemented
# for autoconf.
if use examples; then
# These are all useless outside the source tree
rm -f {examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
rm -f hl/{examples,c++/examples,fortran/examples}/{Makefile*,CMake*}
dodoc -r examples
if use cxx; then
docinto c++
dodoc -r c++/examples
fi
if use fortran; then
docinto fortran
dodoc -r fortran/examples
fi
if use hl; then
docinto hl
dodoc -r hl/examples
if use cxx; then
docinto hl/c++
dodoc -r hl/c++/examples
fi
if use fortran; then
docinto hl/fortran
dodoc -r hl/fortran/examples
fi
fi
fi
}

1
sci-libs/hdf5/metadata.xml
View File

@@ -13,7 +13,6 @@
</longdescription>
<use>
<flag name="hl">Enable high level API (https://support.hdfgroup.org/HDF5/doc/HL/index.html)</flag>
<flag name="ros3">Enable support for read-only S3 access (https://portal.hdfgroup.org/display/HDF5/Configuration+and+Setup+for+HDF5+Read+Only+S3+VFD)</flag>
<flag name="unsupported">Enable unsupported combinations of configuration options</flag>
</use>
<upstream>