Eli Schwartz 7aa3a581c4 sci-libs/netcdf: fix bad bash scripting leading to failed tests ...

If USE=-mpi, a file in src_test is NOT sedded to fix a bug in the file,
because the file does not exist. But this condition was incorrectly
coded.

In bash:

```
cmd1 && cmd2 || cmd3
```

is a code smell. If either of the first two commands fails, the third
command is run -- in this case, die. In other words, the first two
commands were *supposed* to be "only run cmd2 if it makes sense to".
Instead, if it "doesn't make sense to" run cmd2, the die was triggered.

A more general solution is to spec the build format to require all
commands to pass without manually `die`ing (leading to the use of &&
ceasing in general), but that is not how portage works. Either way, the
solution is using `if` as intended.

ref. https://mywiki.wooledge.org/BashGuide/TestsAndConditionals

Closes: https://bugs.gentoo.org/933136
Signed-off-by: Eli Schwartz <eschwartz93@gmail.com>
Signed-off-by: Sam James <sam@gentoo.org>

2024-05-30 00:46:07 +01:00

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adolc

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alglib

sci-libs/alglib: filter LTO, no-SA

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armadillo

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sci-libs/arpack: mark as LTO-unsafe

2024-03-06 05:29:50 +00:00

arprec

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atlas

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2024-04-30 20:21:05 +02:00

avogadrolibs

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beagle

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2024-04-30 20:21:05 +02:00

blis

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bliss

sci-libs/bliss: fix libbliss underlinking in a new revision

2024-01-22 07:06:29 -05:00

branca

sci-libs/branca: add 0.7.2

2024-05-07 08:40:30 +02:00

brial

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btf

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buddy

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2024-04-30 20:21:05 +02:00

caffe2

sci-libs/caffe2: drop 2.1.2-r7

2024-05-26 17:18:13 +02:00

camd

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cantera

sci-libs/cantera: Remove old

2024-02-28 17:48:44 +01:00

cartopy

sci-libs/cartopy: drop 0.21.1-r1, 0.22.0

2024-04-22 19:52:41 +02:00

ccfits

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ccolamd

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cddlib

sci-libs/cddlib: update EAPI 7 -> 8

2024-03-22 05:31:49 +00:00

cdf

sci-libs/cdf: backport LTO filter to stable

2024-03-22 08:43:29 +00:00

ceres-solver

sci-libs/ceres-solver: Stabilize 2.2.0-r1 amd64, #933039

2024-05-29 12:45:47 +01:00

cfitsio

sci-libs/cfitsio: sys-devel/bison -> app-alternatives/yacc

2024-01-08 12:25:10 +00:00

cgcode

sci-libs/cgcode: filter LTO, no-SA

2024-03-12 06:11:40 +00:00

cgnslib

sci-libs/cgnslib: fix SLOT to correctly describe soname

2024-03-22 18:27:46 +00:00

cholmod

profiles/use.desc: Make USE=cuda global

2023-12-26 11:46:05 +01:00

cifparse-obj

sci-libs/cifparse-obj: sys-devel/bison -> app-alternatives/yacc

2024-01-08 12:25:11 +00:00

clapack

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clashscore-db

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clblas

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clblast

profiles/use.desc: Make USE=opencl global

2023-12-18 19:52:36 +01:00

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coinhsl

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coinor-alps

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colamd

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colpack

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composable-kernel

sci-libs/composable-kernel: new package, add 5.7.1-r1

2024-03-08 19:21:53 +00:00

cqrlib

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cxsparse

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datasets

sci-libs/datasets: pytorch must be built with numpy support

2024-04-05 09:16:20 +02:00

dcmtk

sci-libs/dcmtk: update LTO comment (fixed upstream in git!)

2024-04-01 06:29:25 +01:00

dealii

sci-libs/dealii: add subslot dep on sci-libs/hdf5

2024-04-23 21:35:59 +01:00

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dlib

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dmlc-core

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2024-01-12 15:36:00 +01:00

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sci-libs/dsdp: drop 5.8-r3, EAPI6--

2024-04-19 09:07:51 +03:00

eccodes

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evaluate

sci-libs/evaluate: scilibs/transformers is now SINGLE_USEDEP

2024-04-28 17:38:21 +02:00

exodusii

sci-libs/exodusii: update remote-id

2024-04-08 20:48:44 +02:00

fcl

Move {app-doc → app-text}/doxygen

2024-01-12 15:36:00 +01:00

fetk

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fflas-ffpack

sci-libs/fflas-ffpack: Stabilize 2.5.0-r1 amd64, #929008

2024-04-09 20:32:31 +03:00

fftw

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flann

sci-libs/flann: add subslot dep on sci-libs/hdf5

2024-04-23 21:33:26 +01:00

foxi

sci-libs/foxi: EmptyGlobalAssignment

2024-01-13 09:42:54 +01:00

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sci-libs/fplll: drop 5.4.4

2024-02-08 20:25:35 -05:00

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gamer

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2024-01-12 15:36:00 +01:00

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2024-04-30 20:21:05 +02:00

gdal

sci-libs/gdal: Fix build with Poppler 24.05

2024-05-14 01:14:25 +02:00

geos

sci-libs/geos: mark as LTO-unsafe

2024-03-14 00:34:35 +00:00

gerris

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getdata

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2024-04-30 20:21:05 +02:00

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givaro

sci-libs/givaro: Stabilize 4.2.0 amd64, #929008

2024-04-09 20:32:31 +03:00

gklib

sci-libs/gklib: Stabilize 5.1.1_p20230327-r1 arm64, #923550

2024-02-03 06:55:01 +00:00

gloo

sci-libs/gloo: add 2023.12.03

2024-05-01 13:44:24 +02:00

gmsh

sci-libs/gmsh: add subslot dep on sci-libs/hdf5

2024-04-23 21:33:30 +01:00

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sci-libs/gts: Stabilize 20121130 arm64, #920913

2023-12-29 15:32:29 +02:00

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h5part

sci-libs/h5part: add subslot dep on sci-libs/hdf5

2024-04-23 21:33:29 +01:00

hdf

sci-libs/hdf: update EAPI 7 -> 8

2024-04-08 06:21:59 +01:00

hdf5

sci-libs/hdf5: add explanatory comment for SLOT

2024-04-23 21:33:25 +01:00

HighFive

sci-libs/HighFive: Remove old

2024-02-28 17:48:44 +01:00

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sci-libs/hipCUB: install cmake files to /usr/lib64/cmake, not /usr/lib/cmake

2024-03-08 19:22:08 +00:00

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sci-libs/hipFFT: cleanup unused flags/variables

2024-03-08 19:22:09 +00:00

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sci-libs/hipSOLVER: new package, add 5.7.1

2024-03-08 19:22:07 +00:00

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2024-01-14 20:23:32 +01:00

htslib

sci-libs/htslib: add 1.20

2024-05-24 10:59:49 +02:00

huggingface_hub

sci-libs/huggingface_hub: add 0.21.4

2024-04-05 11:02:59 +02:00

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sci-libs/ideep: add 3.3.2

2024-03-01 23:28:07 +01:00

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sci-libs/idlcoyote: EAPI8 bump

2024-05-05 20:56:05 +02:00

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ignition-common

sci-libs/ignition-common: bump to 3.17.0

2024-02-05 15:52:56 +01:00

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2024-03-27 12:49:00 +01:00

ignition-math

sci-libs/ignition-math: bump to 6.15.1

2024-02-05 15:52:56 +01:00

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sci-libs/indilib: Fix UnquotedVariable

2024-04-22 20:08:57 +02:00

ipopt

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2024-04-30 20:21:05 +02:00

jama

sci-libs/jama: EAPI 6 -> 8

2024-05-13 12:50:28 +03:00

jiwer

sci-libs/jiwer: add 3.0.3, drop 3.0.1-r1

2024-01-02 20:43:19 +01:00

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sci-libs/kineto: add 0.4.0_p20231127, drop 0.4.0_p20231031-r1

2024-01-21 13:56:01 +01:00

kissfft

sci-libs/kissfft: Stabilize 131.1.0 arm64, #932996

2024-05-29 12:45:24 +01:00

klu

sci-libs/klu: Stabilize 1.3.9-r2 sparc, #927892

2024-04-20 17:51:15 +03:00

lapack

sci-libs/lapack: Stabilize 3.12.0-r1 hppa, #923553

2024-04-04 19:22:19 +03:00

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2024-05-18 12:06:40 +02:00

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2024-03-07 11:46:25 +00:00

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2024-01-12 15:36:00 +01:00

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libhomfly

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libigl

sci-libs/libigl: dropped obsolete 2.4.0

2024-03-02 12:29:26 +01:00

libint

sci-libs/libint: add 2.9.0

2024-03-17 10:41:46 +00:00

libmuscle

sci-libs/libmuscle: update EAPI 6 -> 8

2024-03-22 05:31:48 +00:00

libnova

sci-libs/libnova: use https

2024-03-16 13:13:09 +01:00

liborigin

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2024-04-17 00:34:52 +01:00

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2024-02-24 20:03:16 -05:00

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2024-04-30 20:21:05 +02:00

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linbox

sci-libs/linbox: backport commit to fix gcc 14 build

2024-05-04 09:33:29 -04:00

linux-gpib

sci-libs/linux-gpib: also udev_reload in post_rm

2024-05-03 12:28:16 +02:00

linux-gpib-modules

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2024-04-30 20:21:05 +02:00

lis

sci-libs/lis: add missing dep for switch to zip distfile

2024-04-01 06:29:26 +01:00

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2024-04-30 20:21:05 +02:00

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2024-01-12 15:36:00 +01:00

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metis

sci-libs/metis: drop 5.1.0-r5

2024-03-24 22:02:43 +01:00

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miopen

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2024-03-08 19:21:54 +00:00

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2024-03-21 05:57:37 +00:00

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neartree

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2024-04-30 20:21:05 +02:00

nemesis

sci-libs/nemesis: update remote-id

2024-04-08 20:48:45 +02:00

netcdf

sci-libs/netcdf: fix bad bash scripting leading to failed tests

2024-05-30 00:46:07 +01:00

netcdf-cxx

sci-libs/netcdf-cxx: Stabilize 4.3.1-r1 amd64, #908155

2024-05-07 18:54:35 +01:00

netcdf-fortran

sci-libs/netcdf-fortran: mark as LTO-unsafe

2024-04-01 06:29:26 +01:00

nfft

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nlopt

sci-libs/nlopt: add missing remote-id

2024-04-08 20:48:46 +02:00

NNPACK

sci-libs/NNPACK: PythonCompatUpdate

2024-01-01 11:26:03 +01:00

numkit

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oc

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2024-03-21 05:57:43 +00:00

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ogdi

sci-libs/ogdi: add missing remote-id

2024-04-08 20:48:47 +02:00

onnx

sci-libs/onnx: drop 1.15.0-r3

2024-05-26 19:36:22 +02:00

openblas

sci-libs/openblas: fix symlinks with USE=eselect-ldso

2024-05-02 06:43:27 +01:00

opencascade

sci-libs/opencascasde: fix vtk_components.patch

2024-04-14 17:36:57 +02:00

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p4est

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parmetis

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pastix

profiles/use.desc: Make USE=cuda global

2023-12-26 11:46:05 +01:00

pcl

sci-libs/pcl: bump to 1.14.1

2024-05-23 10:08:37 +02:00

pdal

sci-libs/pdal: drop old

2024-04-24 14:50:46 +02:00

pgplot

sci-libs/pgplot: update EAPI 6 -> 8

2024-04-26 19:16:37 +01:00

plplot

sci-libs/plplot: fix modern C issue in (CMake) configure

2024-05-10 02:24:28 +01:00

primegen

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profnet

sci-libs/profnet: mark as LTO-unsafe

2024-03-06 03:36:17 +00:00

profphd-utils

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proj

sci-libs/proj: add patch to install geotiff files

2024-01-10 14:24:59 +01:00

punc

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2024-01-12 15:36:00 +01:00

pyshp

sci-libs/pyshp: drop 2.3.1-r1

2024-04-22 19:52:41 +02:00

pytorch

sci-libs/pytorch: drop 2.1.2-r1

2024-05-26 17:18:10 +02:00

qd

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QNNPACK

sci-libs/QNNPACK: deps on clog

2024-05-08 19:22:39 +02:00

qrupdate

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2024-04-30 20:21:05 +02:00

rocBLAS

sci-libs/rocBLAS: fix doxygen directory

2024-03-08 19:22:01 +00:00

rocFFT

sci-libs/rocFFT: fix benchmark dependencies and collision with dev-util/perf

2024-03-08 19:22:02 +00:00

rocPRIM

Move {dev-util → dev-build}/cmake

2024-01-14 20:23:32 +01:00

rocRAND

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2024-01-14 20:23:32 +01:00

rocSOLVER

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2024-01-14 20:23:32 +01:00

rocSPARSE

sci-libs/rocSPARSE: lock dev-util/hip version, as with hip-6.0 build fails with "no member named 'gcnArch'"

2024-03-08 19:22:03 +00:00

rocThrust

sci-libs/rocThrust: set include path in cmake config to correct one

2024-03-08 19:22:08 +00:00

rocWMMA

sci-libs/rocWMMA: new package, add 5.7.1

2024-03-08 19:22:10 +00:00

rtabmap

sci-libs/rtabmap: bump to 0.21.3

2024-01-15 09:01:39 +01:00

rtree

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safetensors

sci-libs/safetensors: new package, add 0.4.3, drop 0.3.3

2024-04-28 12:04:21 +02:00

scalapack

sci-libs/scalapack: needs virtual/mpi[fortran]

2024-04-23 21:33:24 +01:00

scotch

sci-libs/scotch: remove redundant double sed

2024-03-21 03:16:04 +00:00

seqeval

Move {sci-libs → dev-python}/scikit-learn

2024-03-10 20:05:55 +01:00

shapelib

sci-libs/shapelib: add 1.6.0, security bump

2024-05-03 12:23:09 +01:00

silo

sci-libs/silo: add subslot dep on sci-libs/hdf5

2024-04-23 21:33:27 +01:00

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2024-04-30 20:21:05 +02:00

stellarsolver

sci-libs/stellarsolver: Fix QA warnings

2024-04-22 19:51:45 +02:00

suitesparse

profiles/use.desc: Make USE=cuda global

2023-12-26 11:46:05 +01:00

suitesparseconfig

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sundials

sci-libs/sundials: mark as LTO-unsafe

2024-03-24 06:56:35 +00:00

superlu

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superlu_mt

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symengine

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2024-01-12 15:36:00 +01:00

symmetrica

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ta-lib

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2024-04-30 20:21:05 +02:00

tamu_anova

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taucs

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tensorpipe

sci-libs/tensorpipe: musl fix

2023-12-31 13:47:20 +01:00

tnt

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tokenizers

sci-libs/tokenizers: enable test

2024-04-14 15:03:26 +02:00

transformers

Revert "sci-libs/transformers: Revert "add 4.37.2, drop 4.36.2""

2024-04-28 17:37:58 +02:00

trilinos

profiles/use.desc: Make USE=cuda global

2023-12-26 11:46:05 +01:00

udunits

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umfpack

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ViSP

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2024-01-12 15:36:00 +01:00

volk

sci-libs/volk: Stabilize 3.1.2 amd64, #908603

2024-05-18 11:18:05 +03:00

voro++

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vtk

sci-libs/vtk: revert "sci-libs/vtk: drop 9.2.5, 9.2.6-r1"

2024-05-07 15:11:24 +02:00

xdmf2

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2024-01-12 15:36:00 +01:00

XNNPACK

sci-libs/XNNPACK: add 2024.02.29

2024-05-01 13:26:55 +02:00

xylib

sci-libs/xylib: add missing remote-id

2024-04-08 20:48:48 +02:00

metadata.xml

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