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sci-biology/hmmer: Cleanup broken versions re bug #421799
Closes: https://bugs.gentoo.org/421799 Package-Manager: Portage-2.3.8, Repoman-2.3.3
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@@ -1,52 +0,0 @@
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# Copyright 1999-2017 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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EAPI=6
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DESCRIPTION="Sequence analysis using profile hidden Markov models"
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LICENSE="GPL-2"
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HOMEPAGE="http://hmmer.janelia.org/"
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SRC_URI="ftp://ftp.genetics.wustl.edu/pub/eddy/${PN}/${PV}/${P}.tar.gz"
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SLOT="0"
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IUSE="threads test"
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KEYWORDS="~amd64 ~x86"
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DEPEND=""
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RDEPEND=""
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src_configure() {
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econf \
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--host=${CHOST} \
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--prefix="${D}"/usr \
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--exec_prefix="${D}"/usr \
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--mandir="${D}"/usr/share/man \
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--enable-lfs \
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$(use_enable threads)
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}
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src_install() {
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emake DESTDIR="${D}" install
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pushd src >/dev/null || die
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dolib libhmmer.a
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insinto /usr/include/hmmer
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doins *.h
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popd >/dev/null || die
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pushd squid >/dev/null || die
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dobin afetch alistat compalign compstruct revcomp seqstat seqsplit sfetch shuffle sreformat sindex weight translate
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dolib libsquid.a
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insinto /usr/include/hmmer
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doins *.h
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popd >/dev/null || die
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dodoc NOTES
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newdoc 00README README
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insinto /usr/share/doc/${PF}
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doins Userguide.pdf
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}
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src_test() {
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emake check
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}
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