mirror of
https://github.com/gentoo-mirror/gentoo.git
synced 2026-09-23 16:49:10 -07:00
dev-python/scipy: Bump to 1.6.1
Signed-off-by: Michał Górny <mgorny@gentoo.org>
This commit is contained in:
Michał Górny
@@ -16,3 +16,6 @@ DIST scipy-1.5.4.tar.gz 25237512 BLAKE2B 719cfecd6794b037dc636793ba38a3b39f5fd1a
|
||||
DIST scipy-1.6.0-html.zip 23941941 BLAKE2B 3222e9b1e1aeebfd1ab0f8d179d25c25d6ab26a54c3d6c7f12d5cb24dd59af216685cb1db1d11980ca32c8e14595a1753b69438d8c7504f7c4fc1b386e1c944d SHA512 42cd5595e1f260bcd14d5ce159d9acd0eaefbcb1401270b90efe48b0e743681361dba5ee410e5932533bca03c19daaacb6042ef8edea9b2cccd5dae21a612072
|
||||
DIST scipy-1.6.0-ref.pdf 34332184 BLAKE2B 948a03372797915e47d5e8ce44a32dcacb3448a20e06c5233d3362f0f04f228e8f7505aa918dbbd9a50ad64adb7a17181acab6a726ab251b8e8acf245a1550d6 SHA512 fe4c316f91cffb10d14207882ceb7a1d3711b03ad74857d771d0ec244caad60f878902f7279f6688c947fd415762abbb5a7082c810dd85c73385e8f58fbc056c
|
||||
DIST scipy-1.6.0.tar.gz 27275413 BLAKE2B f65fca81a21a3077ead119123fc3bb2ed96aaacfee6f291473ef6780c291f3e9fee88d86501d4cb966f1d601fb7f0656956134f0437eb8fefb8030e762c363a5 SHA512 995ffaf56b713cdd4bdb98d8525b892e9ad84a511878b43213cb71a67f34d87c111da36cf1e0b044c75c0d5af64bfde4ad0f3e9c5e71cae2dbf053251f37064e
|
||||
DIST scipy-1.6.1-html.zip 23946591 BLAKE2B d3464c342b1d4f43e17e214c7557737913bf4131f88b9d569cff106c75dc7ebf0d065283792fddc189e2a3ddc322f1b2b4f38c6d313569f28395e79680060b58 SHA512 73561f9daa303c6e967f9b11952c6239dea7ff1a2fa02434354ac78fcffe7a552aa0f1043a17cb5c35a442def499eff199856cca8efa1415449cbf54f0d4913b
|
||||
DIST scipy-1.6.1-ref.pdf 34594740 BLAKE2B 905ddcd7a3d462b09ded688f0818204d7684fa18058d0dac480d0a000e9ea0b7ebcdd33c01adae17234dcdf630d4aef9078174127af46f1db55d5c14b3245346 SHA512 355f4681439c1720f45dca6badfe72d77edfca0962fd9b42df34f1cd8fff7121fa6e7f60570bb638abd3ba9693930fa46b25af862d8fc1568b508c6fdd785479
|
||||
DIST scipy-1.6.1.tar.gz 27346828 BLAKE2B 147d7b3f796023fe557f07b46eefa1b23631106556ff56bb0ab5640d7dccfa86fecc2031ba0571eee2560a9bf86705a5ef32527852650e6d0629a722574bf135 SHA512 778a7bca15bb880a3fd1c3d46ef753920335eca95fe5f2b8512883a2aec1bb8e9d8a8fdbf4fee90e823e31980408a51451cc53d4f10c632cd72faf2856c868c8
|
||||
|
||||
155
dev-python/scipy/scipy-1.6.1.ebuild
Normal file
155
dev-python/scipy/scipy-1.6.1.ebuild
Normal file
@@ -0,0 +1,155 @@
|
||||
# Copyright 1999-2021 Gentoo Authors
|
||||
# Distributed under the terms of the GNU General Public License v2
|
||||
|
||||
EAPI=7
|
||||
|
||||
PYTHON_COMPAT=( python3_{7..9} )
|
||||
PYTHON_REQ_USE="threads(+)"
|
||||
|
||||
inherit fortran-2 distutils-r1 flag-o-matic multiprocessing toolchain-funcs
|
||||
|
||||
DESCRIPTION="Scientific algorithms library for Python"
|
||||
HOMEPAGE="https://www.scipy.org/"
|
||||
SRC_URI="
|
||||
mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz
|
||||
doc? (
|
||||
https://docs.scipy.org/doc/${P}/${PN}-html-${PV}.zip -> ${P}-html.zip
|
||||
https://docs.scipy.org/doc/${P}/${PN}-ref-${PV}.pdf -> ${P}-ref.pdf
|
||||
)"
|
||||
|
||||
LICENSE="BSD LGPL-2"
|
||||
SLOT="0"
|
||||
KEYWORDS="~amd64 ~arm ~arm64 ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
|
||||
IUSE="doc sparse test"
|
||||
RESTRICT="!test? ( test )"
|
||||
|
||||
DEPEND="
|
||||
>=dev-python/numpy-1.16.5[lapack,${PYTHON_USEDEP}]
|
||||
sci-libs/arpack:0=
|
||||
virtual/cblas
|
||||
virtual/lapack
|
||||
sparse? ( sci-libs/umfpack:0= )"
|
||||
RDEPEND="${DEPEND}
|
||||
dev-python/pillow[${PYTHON_USEDEP}]"
|
||||
BDEPEND="
|
||||
dev-lang/swig
|
||||
>=dev-python/cython-0.29.13[${PYTHON_USEDEP}]
|
||||
dev-python/pybind11[${PYTHON_USEDEP}]
|
||||
virtual/pkgconfig
|
||||
doc? ( app-arch/unzip )
|
||||
test? (
|
||||
dev-python/nose[${PYTHON_USEDEP}]
|
||||
dev-python/pytest[${PYTHON_USEDEP}]
|
||||
)"
|
||||
|
||||
DISTUTILS_IN_SOURCE_BUILD=1
|
||||
|
||||
src_unpack() {
|
||||
default
|
||||
if use doc; then
|
||||
unzip -qo "${DISTDIR}"/${P}-html.zip -d html || die
|
||||
fi
|
||||
}
|
||||
|
||||
pc_incdir() {
|
||||
$(tc-getPKG_CONFIG) --cflags-only-I $@ | \
|
||||
sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||'
|
||||
}
|
||||
|
||||
pc_libdir() {
|
||||
$(tc-getPKG_CONFIG) --libs-only-L $@ | \
|
||||
sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||'
|
||||
}
|
||||
|
||||
pc_libs() {
|
||||
$(tc-getPKG_CONFIG) --libs-only-l $@ | \
|
||||
sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \
|
||||
-e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \
|
||||
| tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||'
|
||||
}
|
||||
|
||||
python_prepare_all() {
|
||||
# scipy automatically detects libraries by default
|
||||
export {FFTW,FFTW3,UMFPACK}=None
|
||||
use sparse && unset UMFPACK
|
||||
# the missing symbols are in -lpythonX.Y, but since the version can
|
||||
# differ, we just introduce the same scaryness as on Linux/ELF
|
||||
[[ ${CHOST} == *-darwin* ]] \
|
||||
&& append-ldflags -bundle "-undefined dynamic_lookup" \
|
||||
|| append-ldflags -shared
|
||||
[[ -z ${FC} ]] && export FC="$(tc-getFC)"
|
||||
# hack to force F77 to be FC until bug #278772 is fixed
|
||||
[[ -z ${F77} ]] && export F77="$(tc-getFC)"
|
||||
export F90="${FC}"
|
||||
export SCIPY_FCONFIG="config_fc --noopt --noarch"
|
||||
append-fflags -fPIC
|
||||
|
||||
local libdir="${EPREFIX}"/usr/$(get_libdir)
|
||||
cat >> site.cfg <<-EOF || die
|
||||
[blas]
|
||||
include_dirs = $(pc_incdir cblas)
|
||||
library_dirs = $(pc_libdir cblas blas):${libdir}
|
||||
blas_libs = $(pc_libs cblas blas)
|
||||
[lapack]
|
||||
library_dirs = $(pc_libdir lapack):${libdir}
|
||||
lapack_libs = $(pc_libs lapack)
|
||||
EOF
|
||||
cat >> setup.cfg <<-EOF || die
|
||||
[options]
|
||||
zip_safe = False
|
||||
EOF
|
||||
|
||||
# Drop hashes to force rebuild of cython based .c code
|
||||
rm cythonize.dat || die
|
||||
|
||||
# TODO
|
||||
sed -e 's:test_magic_square_sparse_no_presolve:_&:' \
|
||||
-i scipy/optimize/tests/test_linprog.py || die
|
||||
sed -e "s:== 'levy_stable':in ('levy_stable', 'crystalball', 'ncf'):" \
|
||||
-i scipy/stats/tests/test_continuous_basic.py || die
|
||||
|
||||
distutils-r1_python_prepare_all
|
||||
}
|
||||
|
||||
python_configure_all() {
|
||||
# bug 721860
|
||||
test-flag-FC -fallow-argument-mismatch &&
|
||||
append-fflags -fallow-argument-mismatch
|
||||
}
|
||||
|
||||
python_compile() {
|
||||
# FIXME: parallel python building fails, bug #614464
|
||||
export MAKEOPTS=-j1
|
||||
|
||||
${EPYTHON} tools/cythonize.py || die
|
||||
distutils-r1_python_compile \
|
||||
${SCIPY_FCONFIG}
|
||||
}
|
||||
|
||||
python_test() {
|
||||
# fails with bdist_egg. should it be fixed in distutils-r1 eclass?
|
||||
distutils_install_for_testing ${SCIPY_FCONFIG}
|
||||
cd "${TEST_DIR}/lib" || die "no ${TEST_DIR} available"
|
||||
PYTHONPATH=. "${EPYTHON}" -c "
|
||||
import scipy, sys
|
||||
r = scipy.test('fast', verbose=2)
|
||||
sys.exit(0 if r else 1)" || die "Tests fail with ${EPYTHON}"
|
||||
}
|
||||
|
||||
python_install_all() {
|
||||
use doc && \
|
||||
local DOCS=( "${DISTDIR}"/${P}-ref.pdf ) \
|
||||
local HTML_DOCS=( "${WORKDIR}"/html/. )
|
||||
distutils-r1_python_install_all
|
||||
}
|
||||
|
||||
python_install() {
|
||||
distutils-r1_python_install ${SCIPY_FCONFIG}
|
||||
python_optimize
|
||||
}
|
||||
|
||||
pkg_postinst() {
|
||||
elog "You might want to set the variable SCIPY_PIL_IMAGE_VIEWER"
|
||||
elog "to your prefered image viewer. Example:"
|
||||
elog " echo \"export SCIPY_PIL_IMAGE_VIEWER=display\" >> ~/.bashrc"
|
||||
}
|
||||
Reference in New Issue
Block a user