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dev-python/pandas: Remove old
Signed-off-by: Michał Górny <mgorny@gentoo.org>
This commit is contained in:
Michał Górny
@@ -1,2 +1 @@
|
||||
DIST pandas-2.2.2.tar.gz 4398391 BLAKE2B 6b723d85c500abaca4d833e4fb329d9a495e3e8ae51c74632111b139ed38ca9e26087ba43ecc40d68f66613352dc140bb2f1b0cbb92915bb027548886072fc79 SHA512 85b006f96bd6400aeea2ec29df3557ea6c4bfee0a7aebb172547a43171dc0e7682d15f798081846a4f464559ab83f579cfe06d66d4b5c0cb0fb2975c2ef98f9c
|
||||
DIST pandas-2.2.3.tar.gz 4399213 BLAKE2B eca6d31b21f6385c606b3c6f8f4eedc5871719ad5e039e99c01cc16e335a493c2159d208c2d88b573b661adbeaf1172ea1296d13d51b60602966cbc344dc367b SHA512 9bbff5cf51d7fe5e53b207b3593ba92560dabb15294d6509c5be55e0c2a737fad156ca46e56a7e0bfba7d791edfbcbdf885d6f82e2e1a48b2d5e0fc0ef5e56f5
|
||||
|
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@@ -1,117 +0,0 @@
|
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From ad0ef9233f4e6366faf9512d512ec5248ade6d5e Mon Sep 17 00:00:00 2001
|
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From: Lysandros Nikolaou <lisandrosnik@gmail.com>
|
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Date: Tue, 25 Jun 2024 03:40:22 +0200
|
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Subject: [PATCH] ENH: Fix Python 3.13 test failures & enable CI (#59065)
|
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|
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* ENH: Fix Python 3.13 test failures & enable CI
|
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|
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x-ref #58734
|
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|
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Co-authored-by: Thomas Li <47963215+lithomas1@users.noreply.github.com>
|
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|
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* Cast npy_intp to int to fix Windows CI
|
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|
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---------
|
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|
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Co-authored-by: Thomas Li <47963215+lithomas1@users.noreply.github.com>
|
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---
|
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.github/workflows/unit-tests.yml | 4 ++--
|
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pandas/_libs/src/vendored/ujson/python/objToJSON.c | 12 ++++++------
|
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pandas/_libs/tslibs/offsets.pyx | 7 ++++++-
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pandas/tests/groupby/test_groupby.py | 4 +++-
|
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pandas/tests/io/parser/test_dialect.py | 2 +-
|
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pandas/tests/io/test_common.py | 5 ++++-
|
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pandas/tests/io/xml/test_xml.py | 2 +-
|
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pandas/tests/scalar/timedelta/test_arithmetic.py | 1 +
|
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8 files changed, 24 insertions(+), 13 deletions(-)
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|
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diff --git a/pandas/_libs/tslibs/offsets.pyx b/pandas/_libs/tslibs/offsets.pyx
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index c37a4b285d..5dacd7dd55 100644
|
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--- a/pandas/_libs/tslibs/offsets.pyx
|
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+++ b/pandas/_libs/tslibs/offsets.pyx
|
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@@ -4960,7 +4960,12 @@ cpdef to_offset(freq, bint is_period=False):
|
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if result is None:
|
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raise ValueError(INVALID_FREQ_ERR_MSG.format(freq))
|
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|
||||
- if is_period and not hasattr(result, "_period_dtype_code"):
|
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+ try:
|
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+ has_period_dtype_code = hasattr(result, "_period_dtype_code")
|
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+ except ValueError:
|
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+ has_period_dtype_code = False
|
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+
|
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+ if is_period and not has_period_dtype_code:
|
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if isinstance(freq, str):
|
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raise ValueError(f"{result.name} is not supported as period frequency")
|
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else:
|
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diff --git a/pandas/tests/groupby/test_groupby.py b/pandas/tests/groupby/test_groupby.py
|
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index ed9acdd0c9..44d6340e55 100644
|
||||
--- a/pandas/tests/groupby/test_groupby.py
|
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+++ b/pandas/tests/groupby/test_groupby.py
|
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@@ -2816,7 +2816,9 @@ def test_rolling_wrong_param_min_period():
|
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test_df = DataFrame([name_l, val_l]).T
|
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test_df.columns = ["name", "val"]
|
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|
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- result_error_msg = r"__init__\(\) got an unexpected keyword argument 'min_period'"
|
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+ result_error_msg = (
|
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+ r"^[a-zA-Z._]*\(\) got an unexpected keyword argument 'min_period'"
|
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+ )
|
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with pytest.raises(TypeError, match=result_error_msg):
|
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test_df.groupby("name")["val"].rolling(window=2, min_period=1).sum()
|
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|
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diff --git a/pandas/tests/io/parser/test_dialect.py b/pandas/tests/io/parser/test_dialect.py
|
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index 7a72e66996..803114723b 100644
|
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--- a/pandas/tests/io/parser/test_dialect.py
|
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+++ b/pandas/tests/io/parser/test_dialect.py
|
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@@ -26,7 +26,7 @@ def custom_dialect():
|
||||
"escapechar": "~",
|
||||
"delimiter": ":",
|
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"skipinitialspace": False,
|
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- "quotechar": "~",
|
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+ "quotechar": "`",
|
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"quoting": 3,
|
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}
|
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return dialect_name, dialect_kwargs
|
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diff --git a/pandas/tests/io/test_common.py b/pandas/tests/io/test_common.py
|
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index 0740338686..e51f865630 100644
|
||||
--- a/pandas/tests/io/test_common.py
|
||||
+++ b/pandas/tests/io/test_common.py
|
||||
@@ -485,7 +485,10 @@ class TestMMapWrapper:
|
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df.to_csv(path, compression=compression_, encoding=encoding)
|
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|
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# reading should fail (otherwise we wouldn't need the warning)
|
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- msg = r"UTF-\d+ stream does not start with BOM"
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+ msg = (
|
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+ r"UTF-\d+ stream does not start with BOM|"
|
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+ r"'utf-\d+' codec can't decode byte"
|
||||
+ )
|
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with pytest.raises(UnicodeError, match=msg):
|
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pd.read_csv(path, compression=compression_, encoding=encoding)
|
||||
|
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diff --git a/pandas/tests/io/xml/test_xml.py b/pandas/tests/io/xml/test_xml.py
|
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index 6f429c1ecb..900734e9f0 100644
|
||||
--- a/pandas/tests/io/xml/test_xml.py
|
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+++ b/pandas/tests/io/xml/test_xml.py
|
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@@ -1044,7 +1044,7 @@ def test_utf16_encoding(xml_baby_names, parser):
|
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UnicodeError,
|
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match=(
|
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"UTF-16 stream does not start with BOM|"
|
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- "'utf-16-le' codec can't decode byte"
|
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+ "'utf-16(-le)?' codec can't decode byte"
|
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),
|
||||
):
|
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read_xml(xml_baby_names, encoding="UTF-16", parser=parser)
|
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diff --git a/pandas/tests/scalar/timedelta/test_arithmetic.py b/pandas/tests/scalar/timedelta/test_arithmetic.py
|
||||
index d2fa0f722c..33ac121076 100644
|
||||
--- a/pandas/tests/scalar/timedelta/test_arithmetic.py
|
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+++ b/pandas/tests/scalar/timedelta/test_arithmetic.py
|
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@@ -622,6 +622,7 @@ class TestTimedeltaMultiplicationDivision:
|
||||
[
|
||||
r"Invalid dtype datetime64\[D\] for __floordiv__",
|
||||
"'dtype' is an invalid keyword argument for this function",
|
||||
+ "this function got an unexpected keyword argument 'dtype'",
|
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r"ufunc '?floor_divide'? cannot use operands with types",
|
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]
|
||||
)
|
||||
--
|
||||
2.45.2
|
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|
||||
@@ -1,235 +0,0 @@
|
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# Copyright 1999-2024 Gentoo Authors
|
||||
# Distributed under the terms of the GNU General Public License v2
|
||||
|
||||
EAPI=8
|
||||
|
||||
DISTUTILS_EXT=1
|
||||
DISTUTILS_USE_PEP517=meson-python
|
||||
PYTHON_COMPAT=( python3_{10..13} )
|
||||
PYTHON_REQ_USE="threads(+)"
|
||||
|
||||
VIRTUALX_REQUIRED="manual"
|
||||
|
||||
inherit distutils-r1 optfeature pypi virtualx
|
||||
|
||||
DESCRIPTION="Powerful data structures for data analysis and statistics"
|
||||
HOMEPAGE="
|
||||
https://pandas.pydata.org/
|
||||
https://github.com/pandas-dev/pandas/
|
||||
https://pypi.org/project/pandas/
|
||||
"
|
||||
|
||||
LICENSE="BSD"
|
||||
SLOT="0"
|
||||
KEYWORDS="amd64 ~arm64 ~loong ~riscv ~x86"
|
||||
IUSE="big-endian full-support minimal test X"
|
||||
RESTRICT="!test? ( test )"
|
||||
|
||||
RECOMMENDED_DEPEND="
|
||||
>=dev-python/bottleneck-1.3.4[${PYTHON_USEDEP}]
|
||||
>=dev-python/numexpr-2.8.0[${PYTHON_USEDEP}]
|
||||
"
|
||||
|
||||
# TODO: add pandas-gbq to the tree
|
||||
# TODO: Re-add dev-python/statsmodel[python3_11] dep once it supports python3_11
|
||||
# https://github.com/statsmodels/statsmodels/issues/8287
|
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OPTIONAL_DEPEND="
|
||||
>=dev-python/beautifulsoup4-4.11.1[${PYTHON_USEDEP}]
|
||||
dev-python/blosc[${PYTHON_USEDEP}]
|
||||
>=dev-python/html5lib-1.1[${PYTHON_USEDEP}]
|
||||
>=dev-python/jinja2-3.1.2[${PYTHON_USEDEP}]
|
||||
>=dev-python/lxml-4.8.0[${PYTHON_USEDEP}]
|
||||
>=dev-python/matplotlib-3.6.1[${PYTHON_USEDEP}]
|
||||
>=dev-python/openpyxl-3.0.7[${PYTHON_USEDEP}]
|
||||
>=dev-python/sqlalchemy-1.4.36[${PYTHON_USEDEP}]
|
||||
>=dev-python/tabulate-0.8.10[${PYTHON_USEDEP}]
|
||||
>=dev-python/xarray-2022.3.0[${PYTHON_USEDEP}]
|
||||
>=dev-python/xlrd-2.0.1[${PYTHON_USEDEP}]
|
||||
>=dev-python/xlsxwriter-3.0.3[${PYTHON_USEDEP}]
|
||||
>=dev-python/xlwt-1.3.0[${PYTHON_USEDEP}]
|
||||
!arm? ( !hppa? ( !ppc? ( !x86? (
|
||||
>=dev-python/scipy-1.8.1[${PYTHON_USEDEP}]
|
||||
dev-python/statsmodels[${PYTHON_USEDEP}]
|
||||
) ) ) )
|
||||
!big-endian? (
|
||||
>=dev-python/tables-3.7.0[${PYTHON_USEDEP}]
|
||||
)
|
||||
X? (
|
||||
|| (
|
||||
>=dev-python/PyQt5-5.15.6[${PYTHON_USEDEP}]
|
||||
>=dev-python/QtPy-2.2.0[${PYTHON_USEDEP}]
|
||||
x11-misc/xclip
|
||||
x11-misc/xsel
|
||||
)
|
||||
)
|
||||
"
|
||||
DEPEND="
|
||||
>=dev-python/numpy-1.23.2:=[${PYTHON_USEDEP}]
|
||||
"
|
||||
COMMON_DEPEND="
|
||||
${DEPEND}
|
||||
>=dev-python/python-dateutil-2.8.2[${PYTHON_USEDEP}]
|
||||
>=dev-python/pytz-2020.1[${PYTHON_USEDEP}]
|
||||
"
|
||||
BDEPEND="
|
||||
${COMMON_DEPEND}
|
||||
>=dev-build/meson-1.2.1
|
||||
>=dev-python/cython-3.0.5[${PYTHON_USEDEP}]
|
||||
>=dev-python/versioneer-0.28[${PYTHON_USEDEP}]
|
||||
test? (
|
||||
${VIRTUALX_DEPEND}
|
||||
${RECOMMENDED_DEPEND}
|
||||
${OPTIONAL_DEPEND}
|
||||
dev-libs/apache-arrow[brotli,parquet,snappy]
|
||||
>=dev-python/beautifulsoup4-4.11.1[${PYTHON_USEDEP}]
|
||||
>=dev-python/hypothesis-6.46.1[${PYTHON_USEDEP}]
|
||||
>=dev-python/openpyxl-3.0.10[${PYTHON_USEDEP}]
|
||||
>=dev-python/pyarrow-10.0.1[parquet,${PYTHON_USEDEP}]
|
||||
>=dev-python/pymysql-1.0.2[${PYTHON_USEDEP}]
|
||||
>=dev-python/xlsxwriter-3.0.3[${PYTHON_USEDEP}]
|
||||
x11-misc/xclip
|
||||
x11-misc/xsel
|
||||
)
|
||||
"
|
||||
RDEPEND="
|
||||
${COMMON_DEPEND}
|
||||
dev-python/tzdata[${PYTHON_USEDEP}]
|
||||
!minimal? ( ${RECOMMENDED_DEPEND} )
|
||||
full-support? ( ${OPTIONAL_DEPEND} )
|
||||
"
|
||||
|
||||
EPYTEST_XDIST=1
|
||||
distutils_enable_tests pytest
|
||||
|
||||
PATCHES=(
|
||||
# https://github.com/pandas-dev/pandas/pull/59065
|
||||
"${FILESDIR}/${P}-py313.patch"
|
||||
)
|
||||
|
||||
src_test() {
|
||||
virtx distutils-r1_src_test
|
||||
}
|
||||
|
||||
python_test() {
|
||||
local EPYTEST_DESELECT=(
|
||||
# test for rounding errors, fails if we have better precision
|
||||
# e.g. on amd64 with FMA or on arm64
|
||||
# https://github.com/pandas-dev/pandas/issues/38921
|
||||
tests/window/test_rolling.py::test_rolling_var_numerical_issues
|
||||
|
||||
# TODO; unhappy about DISPLAY?
|
||||
tests/test_downstream.py::test_seaborn
|
||||
|
||||
# OOMs
|
||||
tests/io/parser/test_c_parser_only.py::test_bytes_exceed_2gb
|
||||
|
||||
# TODO: numexpr says "forbidden control characters"
|
||||
tests/computation/test_eval.py::TestOperations::test_multi_line_expression_local_variable
|
||||
'tests/computation/test_eval.py::test_query_token[numexpr-Temp(\xb0C)]'
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryBacktickQuoting::test_lots_of_operators_string
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryBacktickQuoting::test_multiple_spaces
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryBacktickQuoting::test_parenthesis
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryBacktickQuoting::test_start_with_spaces
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryNumExprPandas::test_local_syntax
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryNumExprPandas::test_local_variable_with_in
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryNumExprPandas::test_nested_scope
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryNumExprPandas::test_query_scope
|
||||
|
||||
# TODO: missing data not covered by --no-strict-data-files?
|
||||
tests/io/xml/test_xml.py::test_empty_stylesheet
|
||||
tests/io/xml/test_xml.py::test_wrong_file_path
|
||||
|
||||
# TODO
|
||||
tests/frame/test_arithmetic.py::TestFrameFlexArithmetic::test_floordiv_axis0_numexpr_path
|
||||
|
||||
# deprecation warning
|
||||
tests/io/pytables/test_retain_attributes.py::test_retain_index_attributes2
|
||||
'tests/computation/test_eval.py::TestEval::test_scalar_unary[numexpr-pandas]'
|
||||
|
||||
# Needs 64-bit time_t (TODO: split into 32-bit arch only section)
|
||||
tests/tseries/offsets/test_year.py::test_add_out_of_pydatetime_range
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BusinessDay]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BusinessHour]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BusinessMonthEnd]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BusinessMonthBegin]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BQuarterEnd]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BQuarterBegin]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-CustomBusinessDay]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-CustomBusinessHour]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-CustomBusinessMonthEnd]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-CustomBusinessMonthBegin]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-MonthEnd]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-MonthBegin]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-SemiMonthBegin]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-SemiMonthEnd]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-QuarterEnd]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-LastWeekOfMonth]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-WeekOfMonth]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-Week]'
|
||||
|
||||
# hdf / pytables have alignment problems: bug #911660
|
||||
# https://github.com/pandas-dev/pandas/issues/54396
|
||||
tests/io/pytables/test_append.py::test_append_frame_column_oriented
|
||||
tests/io/pytables/test_store.py::test_select_filter_corner
|
||||
|
||||
# blosc2 version
|
||||
tests/io/pytables/test_file_handling.py::test_complibs\[blosc2-{1..9}\]
|
||||
|
||||
# requires -Werror
|
||||
tests/tslibs/test_to_offset.py::test_to_offset_lowercase_frequency_deprecated
|
||||
tests/tslibs/test_to_offset.py::test_to_offset_uppercase_frequency_deprecated
|
||||
|
||||
# assumes that it will fail due to -mfpmath=387 on 32-bit arches,
|
||||
# so it XPASS-es in every other scenario
|
||||
tests/tools/test_to_timedelta.py::TestTimedeltas::test_to_timedelta_float
|
||||
|
||||
# newer matplotlib?
|
||||
tests/plotting/frame/test_frame.py::TestDataFramePlots::test_group_subplot_invalid_column_name
|
||||
)
|
||||
|
||||
if ! has_version "dev-python/scipy[${PYTHON_USEDEP}]"; then
|
||||
EPYTEST_DESELECT+=(
|
||||
tests/plotting/test_misc.py::test_savefig
|
||||
)
|
||||
fi
|
||||
|
||||
if has_version ">=dev-python/numexpr-2.10[${PYTHON_USEDEP}]"; then
|
||||
EPYTEST_DESELECT+=(
|
||||
'tests/computation/test_eval.py::TestTypeCasting::test_binop_typecasting[numexpr-python-left_right0-float64-/]'
|
||||
'tests/computation/test_eval.py::TestTypeCasting::test_binop_typecasting[numexpr-python-left_right1-float64-/]'
|
||||
'tests/computation/test_eval.py::TestTypeCasting::test_binop_typecasting[numexpr-pandas-left_right0-float64-/]'
|
||||
'tests/computation/test_eval.py::TestTypeCasting::test_binop_typecasting[numexpr-pandas-left_right1-float64-/]'
|
||||
'tests/computation/test_eval.py::TestOperations::test_simple_arith_ops[numexpr-python]'
|
||||
'tests/computation/test_eval.py::TestOperations::test_simple_arith_ops[numexpr-pandas]'
|
||||
)
|
||||
fi
|
||||
|
||||
local -x LC_ALL=C.UTF-8
|
||||
cd "${BUILD_DIR}/install$(python_get_sitedir)" || die
|
||||
"${EPYTHON}" -c "import pandas; pandas.show_versions()" || die
|
||||
# --no-strict-data-files is necessary since upstream prevents data
|
||||
# files from even being included in GitHub archives, sigh
|
||||
# https://github.com/pandas-dev/pandas/issues/54907
|
||||
local -x PYTEST_DISABLE_PLUGIN_AUTOLOAD=1
|
||||
epytest pandas/tests \
|
||||
--no-strict-data-files -o xfail_strict=false \
|
||||
-m "not single_cpu and not slow and not network and not db" ||
|
||||
die "Tests failed with ${EPYTHON}"
|
||||
rm test-data.xml test_stata.dta || die
|
||||
}
|
||||
|
||||
pkg_postinst() {
|
||||
optfeature "accelerating certain types of NaN evaluations, using specialized cython routines to achieve large speedups." dev-python/bottleneck
|
||||
optfeature "accelerating certain numerical operations, using multiple cores as well as smart chunking and caching to achieve large speedups" ">=dev-python/numexpr-2.1"
|
||||
optfeature "needed for pandas.io.html.read_html" dev-python/beautifulsoup4 dev-python/html5lib dev-python/lxml
|
||||
optfeature "for msgpack compression using blosc" dev-python/blosc
|
||||
optfeature "Template engine for conditional HTML formatting" dev-python/jinja2
|
||||
optfeature "Plotting support" dev-python/matplotlib
|
||||
optfeature "Needed for Excel I/O" ">=dev-python/openpyxl-3.0.10" dev-python/xlsxwriter dev-python/xlrd dev-python/xlwt
|
||||
optfeature "necessary for HDF5-based storage" ">=dev-python/tables-3.7.0"
|
||||
optfeature "R I/O support" dev-python/rpy
|
||||
optfeature "Needed for parts of pandas.stats" dev-python/statsmodels
|
||||
optfeature "SQL database support" ">=dev-python/sqlalchemy-1.4.36"
|
||||
optfeature "miscellaneous statistical functions" dev-python/scipy
|
||||
optfeature "necessary to use pandas.io.clipboard.read_clipboard support" dev-python/PyQt5 dev-python/QtPy dev-python/pygtk x11-misc/xclip x11-misc/xsel
|
||||
}
|
||||
@@ -1,219 +0,0 @@
|
||||
# Copyright 1999-2024 Gentoo Authors
|
||||
# Distributed under the terms of the GNU General Public License v2
|
||||
|
||||
EAPI=8
|
||||
|
||||
DISTUTILS_EXT=1
|
||||
DISTUTILS_USE_PEP517=meson-python
|
||||
PYTHON_COMPAT=( python3_{10..12} )
|
||||
PYTHON_REQ_USE="threads(+)"
|
||||
|
||||
VIRTUALX_REQUIRED="manual"
|
||||
|
||||
inherit distutils-r1 optfeature pypi virtualx
|
||||
|
||||
DESCRIPTION="Powerful data structures for data analysis and statistics"
|
||||
HOMEPAGE="
|
||||
https://pandas.pydata.org/
|
||||
https://github.com/pandas-dev/pandas/
|
||||
https://pypi.org/project/pandas/
|
||||
"
|
||||
|
||||
LICENSE="BSD"
|
||||
SLOT="0"
|
||||
KEYWORDS="amd64 arm64 ~loong ~riscv x86"
|
||||
IUSE="big-endian full-support minimal test X"
|
||||
RESTRICT="!test? ( test )"
|
||||
|
||||
RECOMMENDED_DEPEND="
|
||||
>=dev-python/bottleneck-1.3.4[${PYTHON_USEDEP}]
|
||||
>=dev-python/numexpr-2.8.0[${PYTHON_USEDEP}]
|
||||
"
|
||||
|
||||
# TODO: add pandas-gbq to the tree
|
||||
# TODO: Re-add dev-python/statsmodel[python3_11] dep once it supports python3_11
|
||||
# https://github.com/statsmodels/statsmodels/issues/8287
|
||||
OPTIONAL_DEPEND="
|
||||
>=dev-python/beautifulsoup4-4.11.1[${PYTHON_USEDEP}]
|
||||
dev-python/blosc[${PYTHON_USEDEP}]
|
||||
>=dev-python/html5lib-1.1[${PYTHON_USEDEP}]
|
||||
>=dev-python/jinja2-3.1.2[${PYTHON_USEDEP}]
|
||||
>=dev-python/lxml-4.8.0[${PYTHON_USEDEP}]
|
||||
>=dev-python/matplotlib-3.6.1[${PYTHON_USEDEP}]
|
||||
>=dev-python/openpyxl-3.0.7[${PYTHON_USEDEP}]
|
||||
>=dev-python/sqlalchemy-1.4.36[${PYTHON_USEDEP}]
|
||||
>=dev-python/tabulate-0.8.10[${PYTHON_USEDEP}]
|
||||
>=dev-python/xarray-2022.3.0[${PYTHON_USEDEP}]
|
||||
>=dev-python/xlrd-2.0.1[${PYTHON_USEDEP}]
|
||||
>=dev-python/xlsxwriter-3.0.3[${PYTHON_USEDEP}]
|
||||
>=dev-python/xlwt-1.3.0[${PYTHON_USEDEP}]
|
||||
!arm? ( !hppa? ( !ppc? ( !x86? (
|
||||
>=dev-python/scipy-1.8.1[${PYTHON_USEDEP}]
|
||||
dev-python/statsmodels[${PYTHON_USEDEP}]
|
||||
) ) ) )
|
||||
!big-endian? (
|
||||
>=dev-python/tables-3.7.0[${PYTHON_USEDEP}]
|
||||
)
|
||||
X? (
|
||||
|| (
|
||||
>=dev-python/PyQt5-5.15.6[${PYTHON_USEDEP}]
|
||||
>=dev-python/QtPy-2.2.0[${PYTHON_USEDEP}]
|
||||
x11-misc/xclip
|
||||
x11-misc/xsel
|
||||
)
|
||||
)
|
||||
"
|
||||
DEPEND="
|
||||
>=dev-python/numpy-1.23.2:=[${PYTHON_USEDEP}]
|
||||
"
|
||||
COMMON_DEPEND="
|
||||
${DEPEND}
|
||||
>=dev-python/python-dateutil-2.8.2[${PYTHON_USEDEP}]
|
||||
>=dev-python/pytz-2020.1[${PYTHON_USEDEP}]
|
||||
"
|
||||
BDEPEND="
|
||||
${COMMON_DEPEND}
|
||||
>=dev-build/meson-1.2.1
|
||||
>=dev-python/cython-3.0.5[${PYTHON_USEDEP}]
|
||||
>=dev-python/versioneer-0.28[${PYTHON_USEDEP}]
|
||||
test? (
|
||||
${VIRTUALX_DEPEND}
|
||||
${RECOMMENDED_DEPEND}
|
||||
${OPTIONAL_DEPEND}
|
||||
>=dev-python/beautifulsoup4-4.11.1[${PYTHON_USEDEP}]
|
||||
>=dev-python/hypothesis-6.46.1[${PYTHON_USEDEP}]
|
||||
>=dev-python/openpyxl-3.0.10[${PYTHON_USEDEP}]
|
||||
>=dev-python/pymysql-1.0.2[${PYTHON_USEDEP}]
|
||||
>=dev-python/xlsxwriter-3.0.3[${PYTHON_USEDEP}]
|
||||
x11-misc/xclip
|
||||
x11-misc/xsel
|
||||
!!dev-python/pyarrow
|
||||
)
|
||||
"
|
||||
RDEPEND="
|
||||
${COMMON_DEPEND}
|
||||
dev-python/tzdata[${PYTHON_USEDEP}]
|
||||
!minimal? ( ${RECOMMENDED_DEPEND} )
|
||||
full-support? ( ${OPTIONAL_DEPEND} )
|
||||
"
|
||||
|
||||
EPYTEST_XDIST=1
|
||||
distutils_enable_tests pytest
|
||||
|
||||
src_test() {
|
||||
virtx distutils-r1_src_test
|
||||
}
|
||||
|
||||
python_test() {
|
||||
local EPYTEST_DESELECT=(
|
||||
# test for rounding errors, fails if we have better precision
|
||||
# e.g. on amd64 with FMA or on arm64
|
||||
# https://github.com/pandas-dev/pandas/issues/38921
|
||||
tests/window/test_rolling.py::test_rolling_var_numerical_issues
|
||||
|
||||
# TODO; unhappy about DISPLAY?
|
||||
tests/test_downstream.py::test_seaborn
|
||||
|
||||
# OOMs
|
||||
tests/io/parser/test_c_parser_only.py::test_bytes_exceed_2gb
|
||||
|
||||
# TODO: numexpr says "forbidden control characters"
|
||||
tests/computation/test_eval.py::TestOperations::test_multi_line_expression_local_variable
|
||||
'tests/computation/test_eval.py::test_query_token[numexpr-Temp(\xb0C)]'
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryBacktickQuoting::test_lots_of_operators_string
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryBacktickQuoting::test_multiple_spaces
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryBacktickQuoting::test_parenthesis
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryBacktickQuoting::test_start_with_spaces
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryNumExprPandas::test_local_syntax
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryNumExprPandas::test_local_variable_with_in
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryNumExprPandas::test_nested_scope
|
||||
tests/frame/test_query_eval.py::TestDataFrameQueryNumExprPandas::test_query_scope
|
||||
|
||||
# TODO: missing data not covered by --no-strict-data-files?
|
||||
tests/io/xml/test_xml.py::test_empty_stylesheet
|
||||
tests/io/xml/test_xml.py::test_wrong_file_path
|
||||
|
||||
# TODO
|
||||
tests/frame/test_arithmetic.py::TestFrameFlexArithmetic::test_floordiv_axis0_numexpr_path
|
||||
|
||||
# deprecation warning
|
||||
tests/io/pytables/test_retain_attributes.py::test_retain_index_attributes2
|
||||
'tests/computation/test_eval.py::TestEval::test_scalar_unary[numexpr-pandas]'
|
||||
|
||||
# Needs 64-bit time_t (TODO: split into 32-bit arch only section)
|
||||
tests/tseries/offsets/test_year.py::test_add_out_of_pydatetime_range
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BusinessDay]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BusinessHour]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BusinessMonthEnd]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BusinessMonthBegin]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BQuarterEnd]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-BQuarterBegin]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-CustomBusinessDay]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-CustomBusinessHour]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-CustomBusinessMonthEnd]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-CustomBusinessMonthBegin]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-MonthEnd]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-MonthBegin]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-SemiMonthBegin]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-SemiMonthEnd]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-QuarterEnd]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-LastWeekOfMonth]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-WeekOfMonth]'
|
||||
'tests/tseries/offsets/test_common.py::test_apply_out_of_range[tzlocal()-Week]'
|
||||
|
||||
# hdf / pytables have alignment problems: bug #911660
|
||||
# https://github.com/pandas-dev/pandas/issues/54396
|
||||
tests/io/pytables/test_append.py::test_append_frame_column_oriented
|
||||
tests/io/pytables/test_store.py::test_select_filter_corner
|
||||
|
||||
# blosc2 version
|
||||
tests/io/pytables/test_file_handling.py::test_complibs\[blosc2-{1..9}\]
|
||||
|
||||
# requires -Werror
|
||||
tests/tslibs/test_to_offset.py::test_to_offset_lowercase_frequency_deprecated
|
||||
tests/tslibs/test_to_offset.py::test_to_offset_uppercase_frequency_deprecated
|
||||
|
||||
# requires pyarrow
|
||||
tests/io/formats/style/test_bar.py::test_style_bar_with_pyarrow_NA_values
|
||||
tests/series/test_api.py::TestSeriesMisc::test_inspect_getmembers
|
||||
|
||||
# assumes that it will fail due to -mfpmath=387 on 32-bit arches,
|
||||
# so it XPASS-es in every other scenario
|
||||
tests/tools/test_to_timedelta.py::TestTimedeltas::test_to_timedelta_float
|
||||
)
|
||||
|
||||
if ! has_version "dev-python/scipy[${PYTHON_USEDEP}]"; then
|
||||
EPYTEST_DESELECT+=(
|
||||
tests/plotting/test_misc.py::test_savefig
|
||||
)
|
||||
fi
|
||||
|
||||
local -x LC_ALL=C.UTF-8
|
||||
cd "${BUILD_DIR}/install$(python_get_sitedir)" || die
|
||||
"${EPYTHON}" -c "import pandas; pandas.show_versions()" || die
|
||||
# --no-strict-data-files is necessary since upstream prevents data
|
||||
# files from even being included in GitHub archives, sigh
|
||||
# https://github.com/pandas-dev/pandas/issues/54907
|
||||
local -x PYTEST_DISABLE_PLUGIN_AUTOLOAD=1
|
||||
epytest pandas/tests \
|
||||
--no-strict-data-files \
|
||||
-m "not single_cpu and not slow and not network and not db" ||
|
||||
die "Tests failed with ${EPYTHON}"
|
||||
rm test-data.xml test_stata.dta || die
|
||||
}
|
||||
|
||||
pkg_postinst() {
|
||||
optfeature "accelerating certain types of NaN evaluations, using specialized cython routines to achieve large speedups." dev-python/bottleneck
|
||||
optfeature "accelerating certain numerical operations, using multiple cores as well as smart chunking and caching to achieve large speedups" ">=dev-python/numexpr-2.1"
|
||||
optfeature "needed for pandas.io.html.read_html" dev-python/beautifulsoup4 dev-python/html5lib dev-python/lxml
|
||||
optfeature "for msgpack compression using blosc" dev-python/blosc
|
||||
optfeature "Template engine for conditional HTML formatting" dev-python/jinja2
|
||||
optfeature "Plotting support" dev-python/matplotlib
|
||||
optfeature "Needed for Excel I/O" ">=dev-python/openpyxl-3.0.10" dev-python/xlsxwriter dev-python/xlrd dev-python/xlwt
|
||||
optfeature "necessary for HDF5-based storage" ">=dev-python/tables-3.7.0"
|
||||
optfeature "R I/O support" dev-python/rpy
|
||||
optfeature "Needed for parts of pandas.stats" dev-python/statsmodels
|
||||
optfeature "SQL database support" ">=dev-python/sqlalchemy-1.4.36"
|
||||
optfeature "miscellaneous statistical functions" dev-python/scipy
|
||||
optfeature "necessary to use pandas.io.clipboard.read_clipboard support" dev-python/PyQt5 dev-python/QtPy dev-python/pygtk x11-misc/xclip x11-misc/xsel
|
||||
}
|
||||
Reference in New Issue
Block a user