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dev-python/pandas: Version Bump
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=585184 Move to modern virtualx.eclass usage Package-Manager: portage-2.3.2 Signed-off-by: Justin Lecher <jlec@gentoo.org>
This commit is contained in:
Justin Lecher
@@ -1,3 +1,4 @@
|
||||
DIST pandas-0.16.2.tar.gz 4931751 SHA256 e01853dfe111f3aea005315573400b7216ddbabbf1f28d482a71217d67ae4f81 SHA512 44874e12a42a01dd7ed88f3f97e954732a534a5e2dc4815ef6203bdb2d88850a607e6631a35ae8fc79f4621a5dfaa34f39bb1c9a0ecfb17da1cf0c10f35ff27b WHIRLPOOL 6f2874ac07b49f4b2aaefdb87375b7c5adb31e3ff60c6b808f3e3467ad82999dd894de884ebbfd64fc7235e875d17ce871b516c96ff71a17310b708597168702
|
||||
DIST pandas-0.17.0.tar.gz 6508621 SHA256 320d4fdf734b82adebc8fde9d8ca4b05fe155a72b6f7aa95d76242da8748d6a4 SHA512 bae6964e263c7ff6cac722cdfe23081f23c357d9bc39a670b5627bef4630c236a58aa8c0393eae921721bf7049c8e5266b4dea71dd957da5d89dafc14a04797b WHIRLPOOL d654eb2f9ffbfedbde60e4a6e6ce6f54650a8a68b4d20035744aa55111525d6bba4dae2ccbfce65acf71bb200e2e6029c7f6c9bcc9d0c582d808444738baedb1
|
||||
DIST pandas-0.17.1.tar.gz 6674479 SHA256 cfd7214a7223703fe6999fbe34837749540efee1c985e6aee9933f30e3f72837 SHA512 9d9f9064585b1f3551625e0c8f4eedaaa1253790c2a5cb28e58e70eb805cc18f9770d793aa748cbd76798488ff60efdd01eb4b21daf5ad8f1dc4d9c050487234 WHIRLPOOL 5238575bd64b8d38db4f9a0ea987a7f78ffd1821e5a22bad65c84c407feca3af6f3b536a0a2f337291aa04e94c86fdb40382dad4ce50f8a33a5e26d655c628c2
|
||||
DIST pandas-0.19.1.tar.gz 8360233 SHA256 2509feaeda72fce03675e2eccd2284bb1cadb6a0737008a5e741fe2431d47421 SHA512 6451990a7fae8c6db8ab0b014a13b4f1828754d3998f13c17b111f891fb9fd23f8e09b907623096dfa55668c42298eee1373210a9fddb95f56dd7d552b964e6f WHIRLPOOL 700c0d819ab62134baf56430b7fa8840636ea377d00397341d33ec5f13474d9eeefea245aede80a80f7c16348ef811788947e5fe0020c9770005c74dd1288ef3
|
||||
|
||||
27
dev-python/pandas/files/pandas-0.19.1-gapi.patch
Normal file
27
dev-python/pandas/files/pandas-0.19.1-gapi.patch
Normal file
@@ -0,0 +1,27 @@
|
||||
From 1d6dbb41b26a39121ec8c4f19f5da78bb0ab4af7 Mon Sep 17 00:00:00 2001
|
||||
From: Jeff Reback <jeff@reback.net>
|
||||
Date: Sat, 12 Nov 2016 12:44:06 -0500
|
||||
Subject: [PATCH] TST: skip test_gbq.test_upload_data_if_table_exists_replace
|
||||
for now
|
||||
|
||||
---
|
||||
pandas/io/tests/test_gbq.py | 3 +++
|
||||
1 file changed, 3 insertions(+)
|
||||
|
||||
diff --git a/pandas/io/tests/test_gbq.py b/pandas/io/tests/test_gbq.py
|
||||
index cca1580b8..f6ff35a6d 100644
|
||||
--- a/pandas/io/tests/test_gbq.py
|
||||
+++ b/pandas/io/tests/test_gbq.py
|
||||
@@ -824,6 +824,9 @@ class TestToGBQIntegration(tm.TestCase):
|
||||
private_key=_get_private_key_path())
|
||||
|
||||
def test_upload_data_if_table_exists_replace(self):
|
||||
+
|
||||
+ raise nose.SkipTest("buggy test")
|
||||
+
|
||||
destination_table = DESTINATION_TABLE + "4"
|
||||
|
||||
test_size = 10
|
||||
--
|
||||
2.11.0
|
||||
|
||||
357
dev-python/pandas/files/pandas-0.19.1-seqf.patch
Normal file
357
dev-python/pandas/files/pandas-0.19.1-seqf.patch
Normal file
@@ -0,0 +1,357 @@
|
||||
From f8bd08e9c2fc6365980f41b846bbae4b40f08b83 Mon Sep 17 00:00:00 2001
|
||||
From: Jeff Reback <jeff@reback.net>
|
||||
Date: Sat, 12 Nov 2016 10:58:54 -0500
|
||||
Subject: [PATCH] BUG: segfault manifesting with dateutil=2.6 w.r.t. replace
|
||||
when timezones are present
|
||||
|
||||
closes #14621
|
||||
|
||||
Author: Jeff Reback <jeff@reback.net>
|
||||
|
||||
Closes #14631 from jreback/replace and squashes the following commits:
|
||||
|
||||
3f95042 [Jeff Reback] BUG: segfault manifesting with dateutil=2.6 w.r.t. replace when timezones are present
|
||||
---
|
||||
ci/requirements-3.5_OSX.pip | 2 +-
|
||||
doc/source/whatsnew/v0.19.2.txt | 3 ++
|
||||
pandas/tseries/offsets.py | 1 +
|
||||
pandas/tseries/tests/test_offsets.py | 20 ++++---
|
||||
pandas/tseries/tests/test_timezones.py | 89 +++++++++++++++++++++++++++++--
|
||||
pandas/tseries/tests/test_tslib.py | 5 +-
|
||||
pandas/tslib.pyx | 95 ++++++++++++++++++++++++++++------
|
||||
7 files changed, 188 insertions(+), 27 deletions(-)
|
||||
|
||||
diff --git a/pandas/tseries/offsets.py b/pandas/tseries/offsets.py
|
||||
index 051cc8aa4..2e3852a7e 100644
|
||||
--- a/pandas/tseries/offsets.py
|
||||
+++ b/pandas/tseries/offsets.py
|
||||
@@ -68,6 +68,7 @@ def apply_wraps(func):
|
||||
other = other.tz_localize(None)
|
||||
|
||||
result = func(self, other)
|
||||
+
|
||||
if self._adjust_dst:
|
||||
result = tslib._localize_pydatetime(result, tz)
|
||||
|
||||
diff --git a/pandas/tseries/tests/test_offsets.py b/pandas/tseries/tests/test_offsets.py
|
||||
index 1735ac4e2..768e9212e 100644
|
||||
--- a/pandas/tseries/tests/test_offsets.py
|
||||
+++ b/pandas/tseries/tests/test_offsets.py
|
||||
@@ -1,4 +1,5 @@
|
||||
import os
|
||||
+from distutils.version import LooseVersion
|
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from datetime import date, datetime, timedelta
|
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from dateutil.relativedelta import relativedelta
|
||||
from pandas.compat import range, iteritems
|
||||
@@ -4851,6 +4852,7 @@ class TestDST(tm.TestCase):
|
||||
|
||||
def _test_offset(self, offset_name, offset_n, tstart, expected_utc_offset):
|
||||
offset = DateOffset(**{offset_name: offset_n})
|
||||
+
|
||||
t = tstart + offset
|
||||
if expected_utc_offset is not None:
|
||||
self.assertTrue(get_utc_offset_hours(t) == expected_utc_offset)
|
||||
@@ -4890,17 +4892,23 @@ class TestDST(tm.TestCase):
|
||||
return Timestamp(string + offset_string).tz_convert(tz)
|
||||
|
||||
def test_fallback_plural(self):
|
||||
- """test moving from daylight savings to standard time"""
|
||||
+ # test moving from daylight savings to standard time
|
||||
+ import dateutil
|
||||
for tz, utc_offsets in self.timezone_utc_offsets.items():
|
||||
hrs_pre = utc_offsets['utc_offset_daylight']
|
||||
hrs_post = utc_offsets['utc_offset_standard']
|
||||
- self._test_all_offsets(
|
||||
- n=3, tstart=self._make_timestamp(self.ts_pre_fallback,
|
||||
- hrs_pre, tz),
|
||||
- expected_utc_offset=hrs_post)
|
||||
+
|
||||
+ if dateutil.__version__ != LooseVersion('2.6.0'):
|
||||
+ # buggy ambiguous behavior in 2.6.0
|
||||
+ # GH 14621
|
||||
+ # https://github.com/dateutil/dateutil/issues/321
|
||||
+ self._test_all_offsets(
|
||||
+ n=3, tstart=self._make_timestamp(self.ts_pre_fallback,
|
||||
+ hrs_pre, tz),
|
||||
+ expected_utc_offset=hrs_post)
|
||||
|
||||
def test_springforward_plural(self):
|
||||
- """test moving from standard to daylight savings"""
|
||||
+ # test moving from standard to daylight savings
|
||||
for tz, utc_offsets in self.timezone_utc_offsets.items():
|
||||
hrs_pre = utc_offsets['utc_offset_standard']
|
||||
hrs_post = utc_offsets['utc_offset_daylight']
|
||||
diff --git a/pandas/tseries/tests/test_timezones.py b/pandas/tseries/tests/test_timezones.py
|
||||
index 00e8ee631..db8cda5c7 100644
|
||||
--- a/pandas/tseries/tests/test_timezones.py
|
||||
+++ b/pandas/tseries/tests/test_timezones.py
|
||||
@@ -4,7 +4,7 @@ import nose
|
||||
|
||||
import numpy as np
|
||||
import pytz
|
||||
-
|
||||
+from distutils.version import LooseVersion
|
||||
from pandas.types.dtypes import DatetimeTZDtype
|
||||
from pandas import (Index, Series, DataFrame, isnull, Timestamp)
|
||||
|
||||
@@ -518,8 +518,12 @@ class TestTimeZoneSupportPytz(tm.TestCase):
|
||||
|
||||
times = date_range("2013-10-26 23:00", "2013-10-27 01:00", freq="H",
|
||||
tz=tz, ambiguous='infer')
|
||||
- self.assertEqual(times[0], Timestamp('2013-10-26 23:00', tz=tz))
|
||||
- self.assertEqual(times[-1], Timestamp('2013-10-27 01:00', tz=tz))
|
||||
+ self.assertEqual(times[0], Timestamp('2013-10-26 23:00', tz=tz,
|
||||
+ freq="H"))
|
||||
+ if dateutil.__version__ != LooseVersion('2.6.0'):
|
||||
+ # GH 14621
|
||||
+ self.assertEqual(times[-1], Timestamp('2013-10-27 01:00', tz=tz,
|
||||
+ freq="H"))
|
||||
|
||||
def test_ambiguous_nat(self):
|
||||
tz = self.tz('US/Eastern')
|
||||
@@ -1163,6 +1167,85 @@ class TestTimeZones(tm.TestCase):
|
||||
def setUp(self):
|
||||
tm._skip_if_no_pytz()
|
||||
|
||||
+ def test_replace(self):
|
||||
+ # GH 14621
|
||||
+ # GH 7825
|
||||
+ # replacing datetime components with and w/o presence of a timezone
|
||||
+ dt = Timestamp('2016-01-01 09:00:00')
|
||||
+ result = dt.replace(hour=0)
|
||||
+ expected = Timestamp('2016-01-01 00:00:00')
|
||||
+ self.assertEqual(result, expected)
|
||||
+
|
||||
+ for tz in self.timezones:
|
||||
+ dt = Timestamp('2016-01-01 09:00:00', tz=tz)
|
||||
+ result = dt.replace(hour=0)
|
||||
+ expected = Timestamp('2016-01-01 00:00:00', tz=tz)
|
||||
+ self.assertEqual(result, expected)
|
||||
+
|
||||
+ # we preserve nanoseconds
|
||||
+ dt = Timestamp('2016-01-01 09:00:00.000000123', tz=tz)
|
||||
+ result = dt.replace(hour=0)
|
||||
+ expected = Timestamp('2016-01-01 00:00:00.000000123', tz=tz)
|
||||
+ self.assertEqual(result, expected)
|
||||
+
|
||||
+ # test all
|
||||
+ dt = Timestamp('2016-01-01 09:00:00.000000123', tz=tz)
|
||||
+ result = dt.replace(year=2015, month=2, day=2, hour=0, minute=5,
|
||||
+ second=5, microsecond=5, nanosecond=5)
|
||||
+ expected = Timestamp('2015-02-02 00:05:05.000005005', tz=tz)
|
||||
+ self.assertEqual(result, expected)
|
||||
+
|
||||
+ # error
|
||||
+ def f():
|
||||
+ dt.replace(foo=5)
|
||||
+ self.assertRaises(ValueError, f)
|
||||
+
|
||||
+ def f():
|
||||
+ dt.replace(hour=0.1)
|
||||
+ self.assertRaises(ValueError, f)
|
||||
+
|
||||
+ # assert conversion to naive is the same as replacing tzinfo with None
|
||||
+ dt = Timestamp('2013-11-03 01:59:59.999999-0400', tz='US/Eastern')
|
||||
+ self.assertEqual(dt.tz_localize(None), dt.replace(tzinfo=None))
|
||||
+
|
||||
+ def test_ambiguous_compat(self):
|
||||
+ # validate that pytz and dateutil are compat for dst
|
||||
+ # when the transition happens
|
||||
+ tm._skip_if_no_dateutil()
|
||||
+ tm._skip_if_no_pytz()
|
||||
+
|
||||
+ pytz_zone = 'Europe/London'
|
||||
+ dateutil_zone = 'dateutil/Europe/London'
|
||||
+ result_pytz = (Timestamp('2013-10-27 01:00:00')
|
||||
+ .tz_localize(pytz_zone, ambiguous=0))
|
||||
+ result_dateutil = (Timestamp('2013-10-27 01:00:00')
|
||||
+ .tz_localize(dateutil_zone, ambiguous=0))
|
||||
+ self.assertEqual(result_pytz.value, result_dateutil.value)
|
||||
+ self.assertEqual(result_pytz.value, 1382835600000000000)
|
||||
+
|
||||
+ # dateutil 2.6 buggy w.r.t. ambiguous=0
|
||||
+ if dateutil.__version__ != LooseVersion('2.6.0'):
|
||||
+ # GH 14621
|
||||
+ # https://github.com/dateutil/dateutil/issues/321
|
||||
+ self.assertEqual(result_pytz.to_pydatetime().tzname(),
|
||||
+ result_dateutil.to_pydatetime().tzname())
|
||||
+ self.assertEqual(str(result_pytz), str(result_dateutil))
|
||||
+
|
||||
+ # 1 hour difference
|
||||
+ result_pytz = (Timestamp('2013-10-27 01:00:00')
|
||||
+ .tz_localize(pytz_zone, ambiguous=1))
|
||||
+ result_dateutil = (Timestamp('2013-10-27 01:00:00')
|
||||
+ .tz_localize(dateutil_zone, ambiguous=1))
|
||||
+ self.assertEqual(result_pytz.value, result_dateutil.value)
|
||||
+ self.assertEqual(result_pytz.value, 1382832000000000000)
|
||||
+
|
||||
+ # dateutil < 2.6 is buggy w.r.t. ambiguous timezones
|
||||
+ if dateutil.__version__ > LooseVersion('2.5.3'):
|
||||
+ # GH 14621
|
||||
+ self.assertEqual(str(result_pytz), str(result_dateutil))
|
||||
+ self.assertEqual(result_pytz.to_pydatetime().tzname(),
|
||||
+ result_dateutil.to_pydatetime().tzname())
|
||||
+
|
||||
def test_index_equals_with_tz(self):
|
||||
left = date_range('1/1/2011', periods=100, freq='H', tz='utc')
|
||||
right = date_range('1/1/2011', periods=100, freq='H', tz='US/Eastern')
|
||||
diff --git a/pandas/tseries/tests/test_tslib.py b/pandas/tseries/tests/test_tslib.py
|
||||
index 21cfe84f1..b45f867be 100644
|
||||
--- a/pandas/tseries/tests/test_tslib.py
|
||||
+++ b/pandas/tseries/tests/test_tslib.py
|
||||
@@ -327,8 +327,9 @@ class TestTimestamp(tm.TestCase):
|
||||
|
||||
# dateutil zone change (only matters for repr)
|
||||
import dateutil
|
||||
- if dateutil.__version__ >= LooseVersion(
|
||||
- '2.3') and dateutil.__version__ <= LooseVersion('2.4.0'):
|
||||
+ if (dateutil.__version__ >= LooseVersion('2.3') and
|
||||
+ (dateutil.__version__ <= LooseVersion('2.4.0') or
|
||||
+ dateutil.__version__ >= LooseVersion('2.6.0'))):
|
||||
timezones = ['UTC', 'Asia/Tokyo', 'US/Eastern',
|
||||
'dateutil/US/Pacific']
|
||||
else:
|
||||
diff --git a/pandas/tslib.pyx b/pandas/tslib.pyx
|
||||
index d4eaaa0b5..685de214c 100644
|
||||
--- a/pandas/tslib.pyx
|
||||
+++ b/pandas/tslib.pyx
|
||||
@@ -98,6 +98,7 @@ except NameError: # py3
|
||||
cdef inline object create_timestamp_from_ts(
|
||||
int64_t value, pandas_datetimestruct dts,
|
||||
object tz, object freq):
|
||||
+ """ convenience routine to construct a Timestamp from its parts """
|
||||
cdef _Timestamp ts_base
|
||||
ts_base = _Timestamp.__new__(Timestamp, dts.year, dts.month,
|
||||
dts.day, dts.hour, dts.min,
|
||||
@@ -112,6 +113,7 @@ cdef inline object create_timestamp_from_ts(
|
||||
cdef inline object create_datetime_from_ts(
|
||||
int64_t value, pandas_datetimestruct dts,
|
||||
object tz, object freq):
|
||||
+ """ convenience routine to construct a datetime.datetime from its parts """
|
||||
return datetime(dts.year, dts.month, dts.day, dts.hour,
|
||||
dts.min, dts.sec, dts.us, tz)
|
||||
|
||||
@@ -378,7 +380,6 @@ class Timestamp(_Timestamp):
|
||||
# Mixing pydatetime positional and keyword arguments is forbidden!
|
||||
|
||||
cdef _TSObject ts
|
||||
- cdef _Timestamp ts_base
|
||||
|
||||
if offset is not None:
|
||||
# deprecate offset kwd in 0.19.0, GH13593
|
||||
@@ -412,17 +413,7 @@ class Timestamp(_Timestamp):
|
||||
from pandas.tseries.frequencies import to_offset
|
||||
freq = to_offset(freq)
|
||||
|
||||
- # make datetime happy
|
||||
- ts_base = _Timestamp.__new__(cls, ts.dts.year, ts.dts.month,
|
||||
- ts.dts.day, ts.dts.hour, ts.dts.min,
|
||||
- ts.dts.sec, ts.dts.us, ts.tzinfo)
|
||||
-
|
||||
- # fill out rest of data
|
||||
- ts_base.value = ts.value
|
||||
- ts_base.freq = freq
|
||||
- ts_base.nanosecond = ts.dts.ps / 1000
|
||||
-
|
||||
- return ts_base
|
||||
+ return create_timestamp_from_ts(ts.value, ts.dts, ts.tzinfo, freq)
|
||||
|
||||
def _round(self, freq, rounder):
|
||||
|
||||
@@ -660,8 +651,80 @@ class Timestamp(_Timestamp):
|
||||
astimezone = tz_convert
|
||||
|
||||
def replace(self, **kwds):
|
||||
- return Timestamp(datetime.replace(self, **kwds),
|
||||
- freq=self.freq)
|
||||
+ """
|
||||
+ implements datetime.replace, handles nanoseconds
|
||||
+
|
||||
+ Parameters
|
||||
+ ----------
|
||||
+ kwargs: key-value dict
|
||||
+
|
||||
+ accepted keywords are:
|
||||
+ year, month, day, hour, minute, second, microsecond, nanosecond, tzinfo
|
||||
+
|
||||
+ values must be integer, or for tzinfo, a tz-convertible
|
||||
+
|
||||
+ Returns
|
||||
+ -------
|
||||
+ Timestamp with fields replaced
|
||||
+ """
|
||||
+
|
||||
+ cdef:
|
||||
+ pandas_datetimestruct dts
|
||||
+ int64_t value
|
||||
+ object tzinfo, result, k, v
|
||||
+ _TSObject ts
|
||||
+
|
||||
+ # set to naive if needed
|
||||
+ tzinfo = self.tzinfo
|
||||
+ value = self.value
|
||||
+ if tzinfo is not None:
|
||||
+ value = tz_convert_single(value, 'UTC', tzinfo)
|
||||
+
|
||||
+ # setup components
|
||||
+ pandas_datetime_to_datetimestruct(value, PANDAS_FR_ns, &dts)
|
||||
+ dts.ps = self.nanosecond * 1000
|
||||
+
|
||||
+ # replace
|
||||
+ def validate(k, v):
|
||||
+ """ validate integers """
|
||||
+ if not isinstance(v, int):
|
||||
+ raise ValueError("value must be an integer, received {v} for {k}".format(v=type(v), k=k))
|
||||
+ return v
|
||||
+
|
||||
+ for k, v in kwds.items():
|
||||
+ if k == 'year':
|
||||
+ dts.year = validate(k, v)
|
||||
+ elif k == 'month':
|
||||
+ dts.month = validate(k, v)
|
||||
+ elif k == 'day':
|
||||
+ dts.day = validate(k, v)
|
||||
+ elif k == 'hour':
|
||||
+ dts.hour = validate(k, v)
|
||||
+ elif k == 'minute':
|
||||
+ dts.min = validate(k, v)
|
||||
+ elif k == 'second':
|
||||
+ dts.sec = validate(k, v)
|
||||
+ elif k == 'microsecond':
|
||||
+ dts.us = validate(k, v)
|
||||
+ elif k == 'nanosecond':
|
||||
+ dts.ps = validate(k, v) * 1000
|
||||
+ elif k == 'tzinfo':
|
||||
+ tzinfo = v
|
||||
+ else:
|
||||
+ raise ValueError("invalid name {} passed".format(k))
|
||||
+
|
||||
+ # reconstruct & check bounds
|
||||
+ value = pandas_datetimestruct_to_datetime(PANDAS_FR_ns, &dts)
|
||||
+ if value != NPY_NAT:
|
||||
+ _check_dts_bounds(&dts)
|
||||
+
|
||||
+ # set tz if needed
|
||||
+ if tzinfo is not None:
|
||||
+ value = tz_convert_single(value, tzinfo, 'UTC')
|
||||
+
|
||||
+ result = create_timestamp_from_ts(value, dts, tzinfo, self.freq)
|
||||
+
|
||||
+ return result
|
||||
|
||||
def isoformat(self, sep='T'):
|
||||
base = super(_Timestamp, self).isoformat(sep=sep)
|
||||
@@ -5041,7 +5104,9 @@ cpdef normalize_date(object dt):
|
||||
-------
|
||||
normalized : datetime.datetime or Timestamp
|
||||
"""
|
||||
- if PyDateTime_Check(dt):
|
||||
+ if is_timestamp(dt):
|
||||
+ return dt.replace(hour=0, minute=0, second=0, microsecond=0, nanosecond=0)
|
||||
+ elif PyDateTime_Check(dt):
|
||||
return dt.replace(hour=0, minute=0, second=0, microsecond=0)
|
||||
elif PyDate_Check(dt):
|
||||
return datetime(dt.year, dt.month, dt.day)
|
||||
--
|
||||
2.11.0
|
||||
|
||||
166
dev-python/pandas/pandas-0.19.1.ebuild
Normal file
166
dev-python/pandas/pandas-0.19.1.ebuild
Normal file
@@ -0,0 +1,166 @@
|
||||
# Copyright 1999-2016 Gentoo Foundation
|
||||
# Distributed under the terms of the GNU General Public License v2
|
||||
# $Id$
|
||||
|
||||
EAPI=5
|
||||
|
||||
PYTHON_COMPAT=( python2_7 python3_{4,5} )
|
||||
PYTHON_REQ_USE="threads(+)"
|
||||
|
||||
VIRTUALX_REQUIRED="manual"
|
||||
|
||||
inherit distutils-r1 eutils flag-o-matic virtualx
|
||||
|
||||
DESCRIPTION="Powerful data structures for data analysis and statistics"
|
||||
HOMEPAGE="http://pandas.pydata.org/"
|
||||
SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
|
||||
|
||||
SLOT="0"
|
||||
LICENSE="BSD"
|
||||
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
|
||||
IUSE="doc -minimal full-support test X"
|
||||
|
||||
MINIMAL_DEPEND="
|
||||
>dev-python/numpy-1.7[${PYTHON_USEDEP}]
|
||||
>=dev-python/python-dateutil-2.0[${PYTHON_USEDEP}]
|
||||
dev-python/pytz[${PYTHON_USEDEP}]
|
||||
!<dev-python/numexpr-2.1[${PYTHON_USEDEP}]
|
||||
!~dev-python/openpyxl-1.9.0[${PYTHON_USEDEP}]"
|
||||
RECOMMENDED_DEPEND="
|
||||
dev-python/bottleneck[${PYTHON_USEDEP}]
|
||||
>=dev-python/numexpr-2.1[${PYTHON_USEDEP}]"
|
||||
OPTIONAL_DEPEND="
|
||||
dev-python/beautifulsoup:4[${PYTHON_USEDEP}]
|
||||
dev-python/blosc[${PYTHON_USEDEP}]
|
||||
dev-python/boto[${PYTHON_USEDEP}]
|
||||
>=dev-python/google-api-python-client-1.2.0[$(python_gen_usedep python2_7 pypy)]
|
||||
|| ( dev-python/html5lib[${PYTHON_USEDEP}] dev-python/lxml[${PYTHON_USEDEP}] )
|
||||
dev-python/httplib2[${PYTHON_USEDEP}]
|
||||
dev-python/jinja[${PYTHON_USEDEP}]
|
||||
dev-python/matplotlib[${PYTHON_USEDEP}]
|
||||
|| ( >=dev-python/openpyxl-1.6.1[${PYTHON_USEDEP}] dev-python/xlsxwriter[${PYTHON_USEDEP}] )
|
||||
>=dev-python/pytables-3.2.1[${PYTHON_USEDEP}]
|
||||
dev-python/python-gflags[$(python_gen_usedep python2_7 pypy)]
|
||||
dev-python/rpy[${PYTHON_USEDEP}]
|
||||
dev-python/setuptools[${PYTHON_USEDEP}]
|
||||
dev-python/statsmodels[${PYTHON_USEDEP}]
|
||||
>=dev-python/sqlalchemy-0.8.1[${PYTHON_USEDEP}]
|
||||
dev-python/xlrd[${PYTHON_USEDEP}]
|
||||
dev-python/xlwt[${PYTHON_USEDEP}]
|
||||
sci-libs/scipy[${PYTHON_USEDEP}]
|
||||
X? (
|
||||
|| (
|
||||
dev-python/PyQt4[${PYTHON_USEDEP}]
|
||||
dev-python/pyside[${PYTHON_USEDEP}]
|
||||
dev-python/pygtk[$(python_gen_usedep python2_7)]
|
||||
)
|
||||
|| (
|
||||
x11-misc/xclip
|
||||
x11-misc/xsel
|
||||
)
|
||||
)
|
||||
"
|
||||
|
||||
DEPEND="${MINIMAL_DEPEND}
|
||||
dev-python/setuptools[${PYTHON_USEDEP}]
|
||||
>=dev-python/cython-0.19.1[${PYTHON_USEDEP}]
|
||||
doc? (
|
||||
${VIRTUALX_DEPEND}
|
||||
dev-python/beautifulsoup:4[${PYTHON_USEDEP}]
|
||||
dev-python/html5lib[${PYTHON_USEDEP}]
|
||||
dev-python/ipython[${PYTHON_USEDEP}]
|
||||
dev-python/lxml[${PYTHON_USEDEP}]
|
||||
dev-python/matplotlib[${PYTHON_USEDEP}]
|
||||
>=dev-python/openpyxl-1.6.1[${PYTHON_USEDEP}]
|
||||
>=dev-python/pytables-3.0.0[${PYTHON_USEDEP}]
|
||||
dev-python/pytz[${PYTHON_USEDEP}]
|
||||
dev-python/rpy[${PYTHON_USEDEP}]
|
||||
>=dev-python/sphinx-1.2.1[${PYTHON_USEDEP}]
|
||||
dev-python/xlrd[${PYTHON_USEDEP}]
|
||||
dev-python/xlwt[${PYTHON_USEDEP}]
|
||||
sci-libs/scipy[${PYTHON_USEDEP}]
|
||||
x11-misc/xclip
|
||||
)
|
||||
test? (
|
||||
${VIRTUALX_DEPEND}
|
||||
${RECOMMENDED_DEPEND}
|
||||
${OPTIONAL_DEPEND}
|
||||
dev-python/beautifulsoup:4[${PYTHON_USEDEP}]
|
||||
dev-python/nose[${PYTHON_USEDEP}]
|
||||
dev-python/pymysql[${PYTHON_USEDEP}]
|
||||
dev-python/psycopg:2[${PYTHON_USEDEP}]
|
||||
x11-misc/xclip
|
||||
x11-misc/xsel
|
||||
)"
|
||||
# dev-python/statsmodels invokes a circular dep
|
||||
# hence rm from doc? ( ), again
|
||||
RDEPEND="
|
||||
${MINIMAL_DEPEND}
|
||||
!minimal? ( ${RECOMMENDED_DEPEND} )
|
||||
full-support? ( ${OPTIONAL_DEPEND} )"
|
||||
|
||||
PATCHES=(
|
||||
"${FILESDIR}"/${P}-gapi.patch
|
||||
"${FILESDIR}"/${P}-seqf.patch
|
||||
)
|
||||
|
||||
python_prepare_all() {
|
||||
# Prevent un-needed download during build
|
||||
sed -e "/^ 'sphinx.ext.intersphinx',/d" -i doc/source/conf.py || die
|
||||
|
||||
# https://github.com/pydata/pandas/issues/11299
|
||||
sed \
|
||||
-e 's:testOdArray:disable:g' \
|
||||
-i pandas/io/tests/json/test_ujson.py || die
|
||||
|
||||
distutils-r1_python_prepare_all
|
||||
}
|
||||
|
||||
python_compile_all() {
|
||||
# To build docs the need be located in $BUILD_DIR,
|
||||
# else PYTHONPATH points to unusable modules.
|
||||
if use doc; then
|
||||
cd "${BUILD_DIR}"/lib || die
|
||||
cp -ar "${S}"/doc . && cd doc || die
|
||||
LANG=C PYTHONPATH=. virtx ${EPYTHON} make.py html || die
|
||||
fi
|
||||
}
|
||||
|
||||
python_test() {
|
||||
local test_pandas='not network and not disabled'
|
||||
[[ -n "${FAST_PANDAS}" ]] && test_pandas+=' and not slow'
|
||||
pushd "${BUILD_DIR}"/lib > /dev/null
|
||||
"${EPYTHON}" -c "import pandas; pandas.show_versions()" || die
|
||||
PYTHONPATH=. MPLCONFIGDIR=. \
|
||||
virtx nosetests --verbosity=3 -A "${test_pandas}" pandas
|
||||
popd > /dev/null
|
||||
}
|
||||
|
||||
python_install_all() {
|
||||
if use doc; then
|
||||
dodoc -r "${BUILD_DIR}"/lib/doc/build/html
|
||||
einfo "An initial build of docs is absent of references to statsmodels"
|
||||
einfo "due to circular dependency. To have them included, emerge"
|
||||
einfo "statsmodels next and re-emerge pandas with USE doc"
|
||||
fi
|
||||
|
||||
distutils-r1_python_install_all
|
||||
}
|
||||
|
||||
pkg_postinst() {
|
||||
optfeature "accelerating certain types of NaN evaluations, using specialized cython routines to achieve large speedups." dev-python/bottleneck
|
||||
optfeature "accelerating certain numerical operations, using multiple cores as well as smart chunking and caching to achieve large speedups" >=dev-python/numexpr-2.1
|
||||
optfeature "needed for pandas.io.html.read_html" dev-python/beautifulsoup:4 dev-python/html5lib dev-python/lxml
|
||||
optfeature "for msgpack compression using ``blosc``" dev-python/blosc
|
||||
optfeature "necessary for Amazon S3 access" dev-python/boto
|
||||
optfeature "needed for pandas.io.gbq" dev-python/httplib2 dev-python/setuptools dev-python/python-gflags >=dev-python/google-api-python-client-1.2.0
|
||||
optfeature "Template engine for conditional HTML formatting" dev-python/jinja
|
||||
optfeature "Plotting support" dev-python/matplotlib
|
||||
optfeature "Needed for Excel I/O" >=dev-python/openpyxl-1.6.1 dev-python/xlsxwriter dev-python/xlrd dev-python/xlwt
|
||||
optfeature "necessary for HDF5-based storage" >=dev-python/pytables-3.2.1
|
||||
optfeature "R I/O support" dev-python/rpy
|
||||
optfeature "Needed for parts of :mod:`pandas.stats`" dev-python/statsmodels
|
||||
optfeature "SQL database support" >=dev-python/sqlalchemy-0.8.1
|
||||
optfeature "miscellaneous statistical functions" sci-libs/scipy
|
||||
optfeature "necessary to use ~pandas.io.clipboard.read_clipboard support" dev-python/PyQt4 dev-python/pyside dev-python/pygtk x11-misc/xclip x11-misc/xsel
|
||||
}
|
||||
@@ -1,12 +1,14 @@
|
||||
# Copyright 1999-2015 Gentoo Foundation
|
||||
# Copyright 1999-2016 Gentoo Foundation
|
||||
# Distributed under the terms of the GNU General Public License v2
|
||||
# $Id$
|
||||
|
||||
EAPI=5
|
||||
|
||||
PYTHON_COMPAT=( python2_7 python3_4 )
|
||||
PYTHON_COMPAT=( python2_7 python3_{4,5} )
|
||||
PYTHON_REQ_USE="threads(+)"
|
||||
|
||||
VIRTUALX_REQUIRED="manual"
|
||||
|
||||
inherit distutils-r1 eutils flag-o-matic git-r3 virtualx
|
||||
|
||||
DESCRIPTION="Powerful data structures for data analysis and statistics"
|
||||
@@ -17,68 +19,86 @@ EGIT_REPO_URI="https://github.com/pydata/pandas.git"
|
||||
SLOT="0"
|
||||
LICENSE="BSD"
|
||||
KEYWORDS=""
|
||||
IUSE="doc excel html test R"
|
||||
IUSE="doc -minimal full-support test X"
|
||||
|
||||
EXTRA_DEPEND="
|
||||
>=dev-python/google-api-python-client-1.2.0[$(python_gen_usedep python2_7 pypy)]
|
||||
dev-python/openpyxl[${PYTHON_USEDEP}]
|
||||
dev-python/pymysql[${PYTHON_USEDEP}]
|
||||
dev-python/python-gflags[$(python_gen_usedep python2_7 pypy)]
|
||||
dev-python/psycopg:2[${PYTHON_USEDEP}]
|
||||
dev-python/statsmodels[${PYTHON_USEDEP}]
|
||||
dev-python/sqlalchemy[${PYTHON_USEDEP}]
|
||||
dev-python/xlsxwriter[${PYTHON_USEDEP}]
|
||||
"
|
||||
CDEPEND="
|
||||
MINIMAL_DEPEND="
|
||||
>dev-python/numpy-1.7[${PYTHON_USEDEP}]
|
||||
>=dev-python/python-dateutil-2.0[${PYTHON_USEDEP}]
|
||||
dev-python/pytz[${PYTHON_USEDEP}]
|
||||
!<dev-python/numexpr-2.1[${PYTHON_USEDEP}]
|
||||
!~dev-python/openpyxl-1.9.0[${PYTHON_USEDEP}]"
|
||||
DEPEND="${CDEPEND}
|
||||
RECOMMENDED_DEPEND="
|
||||
dev-python/bottleneck[${PYTHON_USEDEP}]
|
||||
>=dev-python/numexpr-2.1[${PYTHON_USEDEP}]"
|
||||
OPTIONAL_DEPEND="
|
||||
dev-python/beautifulsoup:4[${PYTHON_USEDEP}]
|
||||
dev-python/blosc[${PYTHON_USEDEP}]
|
||||
dev-python/boto[${PYTHON_USEDEP}]
|
||||
>=dev-python/google-api-python-client-1.2.0[$(python_gen_usedep python2_7 pypy)]
|
||||
|| ( dev-python/html5lib[${PYTHON_USEDEP}] dev-python/lxml[${PYTHON_USEDEP}] )
|
||||
dev-python/httplib2[${PYTHON_USEDEP}]
|
||||
dev-python/jinja[${PYTHON_USEDEP}]
|
||||
dev-python/matplotlib[${PYTHON_USEDEP}]
|
||||
|| ( >=dev-python/openpyxl-1.6.1[${PYTHON_USEDEP}] dev-python/xlsxwriter[${PYTHON_USEDEP}] )
|
||||
>=dev-python/pytables-3.2.1[${PYTHON_USEDEP}]
|
||||
dev-python/python-gflags[$(python_gen_usedep python2_7 pypy)]
|
||||
dev-python/rpy[${PYTHON_USEDEP}]
|
||||
dev-python/setuptools[${PYTHON_USEDEP}]
|
||||
dev-python/statsmodels[${PYTHON_USEDEP}]
|
||||
>=dev-python/sqlalchemy-0.8.1[${PYTHON_USEDEP}]
|
||||
dev-python/xlrd[${PYTHON_USEDEP}]
|
||||
dev-python/xlwt[${PYTHON_USEDEP}]
|
||||
sci-libs/scipy[${PYTHON_USEDEP}]
|
||||
X? (
|
||||
|| (
|
||||
dev-python/PyQt4[${PYTHON_USEDEP}]
|
||||
dev-python/pyside[${PYTHON_USEDEP}]
|
||||
dev-python/pygtk[$(python_gen_usedep python2_7)]
|
||||
)
|
||||
|| (
|
||||
x11-misc/xclip
|
||||
x11-misc/xsel
|
||||
)
|
||||
)
|
||||
"
|
||||
|
||||
DEPEND="${MINIMAL_DEPEND}
|
||||
dev-python/setuptools[${PYTHON_USEDEP}]
|
||||
>=dev-python/cython-0.19.1[${PYTHON_USEDEP}]
|
||||
doc? (
|
||||
${VIRTUALX_DEPEND}
|
||||
dev-python/beautifulsoup:4[${PYTHON_USEDEP}]
|
||||
dev-python/ipython[${PYTHON_USEDEP}]
|
||||
dev-python/html5lib[${PYTHON_USEDEP}]
|
||||
dev-python/ipython[${PYTHON_USEDEP}]
|
||||
dev-python/lxml[${PYTHON_USEDEP}]
|
||||
dev-python/matplotlib[${PYTHON_USEDEP}]
|
||||
>=dev-python/openpyxl-1.6.1[${PYTHON_USEDEP}]
|
||||
dev-python/openpyxl[${PYTHON_USEDEP}]
|
||||
>=dev-python/pytables-3.0.0[${PYTHON_USEDEP}]
|
||||
dev-python/pytz[${PYTHON_USEDEP}]
|
||||
dev-python/rpy[${PYTHON_USEDEP}]
|
||||
sci-libs/scipy[${PYTHON_USEDEP}]
|
||||
>=dev-python/sphinx-1.2.1[${PYTHON_USEDEP}]
|
||||
dev-python/xlrd[$(python_gen_usedep 'python2_7')]
|
||||
dev-python/xlwt[$(python_gen_usedep 'python2_7')]
|
||||
dev-python/xlrd[${PYTHON_USEDEP}]
|
||||
dev-python/xlwt[${PYTHON_USEDEP}]
|
||||
sci-libs/scipy[${PYTHON_USEDEP}]
|
||||
x11-misc/xclip
|
||||
)
|
||||
)
|
||||
test? (
|
||||
${EXTRA_DEPEND}
|
||||
${VIRTUALX_DEPEND}
|
||||
${RECOMMENDED_DEPEND}
|
||||
${OPTIONAL_DEPEND}
|
||||
dev-python/beautifulsoup:4[${PYTHON_USEDEP}]
|
||||
dev-python/nose[${PYTHON_USEDEP}]
|
||||
dev-python/pymysql[${PYTHON_USEDEP}]
|
||||
dev-python/psycopg:2[${PYTHON_USEDEP}]
|
||||
x11-misc/xclip
|
||||
x11-misc/xsel
|
||||
)"
|
||||
)"
|
||||
# dev-python/statsmodels invokes a circular dep
|
||||
# hence rm from doc? ( ), again
|
||||
RDEPEND="${CDEPEND}
|
||||
>=dev-python/numexpr-2.1[${PYTHON_USEDEP}]
|
||||
dev-python/bottleneck[${PYTHON_USEDEP}]
|
||||
dev-python/matplotlib[${PYTHON_USEDEP}]
|
||||
dev-python/pytables[${PYTHON_USEDEP}]
|
||||
dev-python/pytz[${PYTHON_USEDEP}]
|
||||
sci-libs/scipy[${PYTHON_USEDEP}]
|
||||
excel? (
|
||||
>=dev-python/openpyxl-1.6.1[${PYTHON_USEDEP}]
|
||||
dev-python/xlrd[$(python_gen_usedep 'python2_7')]
|
||||
dev-python/xlwt[$(python_gen_usedep 'python2_7')]
|
||||
)
|
||||
html? (
|
||||
dev-python/beautifulsoup:4[${PYTHON_USEDEP}]
|
||||
|| (
|
||||
dev-python/lxml[${PYTHON_USEDEP}]
|
||||
dev-python/html5lib[${PYTHON_USEDEP}] )
|
||||
)
|
||||
R? ( dev-python/rpy[${PYTHON_USEDEP}] )"
|
||||
RDEPEND="
|
||||
${MINIMAL_DEPEND}
|
||||
!minimal? ( ${RECOMMENDED_DEPEND} )
|
||||
full-support? ( ${OPTIONAL_DEPEND} )"
|
||||
|
||||
python_prepare_all() {
|
||||
# Prevent un-needed download during build
|
||||
@@ -93,7 +113,7 @@ python_compile_all() {
|
||||
if use doc; then
|
||||
cd "${BUILD_DIR}"/lib || die
|
||||
cp -ar "${S}"/doc . && cd doc || die
|
||||
LANG=C PYTHONPATH=. "${EPYTHON}" make.py html || die
|
||||
LANG=C PYTHONPATH=. virtx ${EPYTHON} make.py html || die
|
||||
fi
|
||||
}
|
||||
|
||||
@@ -101,9 +121,9 @@ python_test() {
|
||||
local test_pandas='not network and not disabled'
|
||||
[[ -n "${FAST_PANDAS}" ]] && test_pandas+=' and not slow'
|
||||
pushd "${BUILD_DIR}"/lib > /dev/null
|
||||
VIRTUALX_COMMAND="nosetests"
|
||||
PYTHONPATH=. MPLCONFIGDIR=. HOME=. \
|
||||
virtualmake --verbosity=3 -A "${test_pandas}" pandas
|
||||
"${EPYTHON}" -c "import pandas; pandas.show_versions()" || die
|
||||
PYTHONPATH=. MPLCONFIGDIR=. \
|
||||
virtx nosetests --verbosity=3 -A "${test_pandas}" pandas.io.tests.json.test_ujson.NumpyJSONTests
|
||||
popd > /dev/null
|
||||
}
|
||||
|
||||
@@ -119,9 +139,19 @@ python_install_all() {
|
||||
}
|
||||
|
||||
pkg_postinst() {
|
||||
local x
|
||||
elog "Please install"
|
||||
for x in ${EXTRA_DEPEND}; do
|
||||
optfeature "additional functionality" "${x%%[*}"
|
||||
done
|
||||
optfeature "accelerating certain types of NaN evaluations, using specialized cython routines to achieve large speedups." dev-python/bottleneck
|
||||
optfeature "accelerating certain numerical operations, using multiple cores as well as smart chunking and caching to achieve large speedups" >=dev-python/numexpr-2.1
|
||||
optfeature "needed for pandas.io.html.read_html" dev-python/beautifulsoup:4 dev-python/html5lib dev-python/lxml
|
||||
optfeature "for msgpack compression using ``blosc``" dev-python/blosc
|
||||
optfeature "necessary for Amazon S3 access" dev-python/boto
|
||||
optfeature "needed for pandas.io.gbq" dev-python/httplib2 dev-python/setuptools dev-python/python-gflags >=dev-python/google-api-python-client-1.2.0
|
||||
optfeature "Template engine for conditional HTML formatting" dev-python/jinja
|
||||
optfeature "Plotting support" dev-python/matplotlib
|
||||
optfeature "Needed for Excel I/O" >=dev-python/openpyxl-1.6.1 dev-python/xlsxwriter dev-python/xlrd dev-python/xlwt
|
||||
optfeature "necessary for HDF5-based storage" >=dev-python/pytables-3.2.1
|
||||
optfeature "R I/O support" dev-python/rpy
|
||||
optfeature "Needed for parts of :mod:`pandas.stats`" dev-python/statsmodels
|
||||
optfeature "SQL database support" >=dev-python/sqlalchemy-0.8.1
|
||||
optfeature "miscellaneous statistical functions" sci-libs/scipy
|
||||
optfeature "necessary to use ~pandas.io.clipboard.read_clipboard support" dev-python/PyQt4 dev-python/pyside dev-python/pygtk x11-misc/xclip x11-misc/xsel
|
||||
}
|
||||
|
||||
Reference in New Issue
Block a user