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dev-python/montage-wrapper: Initial import
Package-Manager: portage-2.3.0_rc1
This commit is contained in:
Sébastien Fabbro
1
dev-python/montage-wrapper/Manifest
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1
dev-python/montage-wrapper/Manifest
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DIST montage-wrapper-0.9.8.tar.gz 208240 SHA256 8f7c468f602e3fa38907e481abaede08fbc4cd17faae0b82d86638c0418aa98e SHA512 a9aeb48f86d055448fdfed3a5c3762b554627db10f1374cbd3f7af6002721ae04e9f47828c2084147be40f79c1c4ce6e56568bf61a6cdd78a31ce91de6365ec1 WHIRLPOOL f224a4fe9dba626700e85a78b309f5db0bf1bac26d27457f6f3eb8a53ae58effbe70043c8c1f311029e36e36082540a9da634821df75366056e9ecb7dbc602f1
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Author: Ole Streicher <olebole@debian.org>
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Description: Make sure that opened FITS files are closed after the test
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--- a/montage_wrapper/tests/test_wrappers.py
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+++ b/montage_wrapper/tests/test_wrappers.py
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@@ -46,21 +46,21 @@
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def test_mosaic(self):
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mosaic(os.path.join(self.tmpdir, 'raw'),os.path.join(self.tmpdir, 'mosaic'), hdu=0)
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- hdu = fits.open(os.path.join(self.tmpdir, 'mosaic', 'mosaic.fits'))[0]
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- assert hdu.data.shape == (288, 282)
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- valid = hdu.data[~np.isnan(hdu.data)]
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- assert len(valid) == 65029
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- assert_allclose(np.std(valid), 0.12658458001333581, 1e-5)
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- assert_allclose(np.mean(valid), 0.4995945318627074, 1e-5)
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- assert_allclose(np.median(valid), 0.5003376603126526, 1e-5)
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+ with fits.open(os.path.join(self.tmpdir, 'mosaic', 'mosaic.fits')) as hdu:
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+ assert hdu[0].data.shape == (288, 282)
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+ valid = hdu[0].data[~np.isnan(hdu[0].data)]
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+ assert len(valid) == 65029
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+ assert_allclose(np.std(valid), 0.12658458001333581, 1e-5)
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+ assert_allclose(np.mean(valid), 0.4995945318627074, 1e-5)
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+ assert_allclose(np.median(valid), 0.5003376603126526, 1e-5)
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@pytest.mark.xfail() # results are not consistent on different machines
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def test_mosaic_background_match(self):
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mosaic(os.path.join(self.tmpdir, 'raw'),os.path.join(self.tmpdir, 'mosaic_bkgmatch'), background_match=True)
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- hdu = fits.open(os.path.join(self.tmpdir, 'mosaic_bkgmatch', 'mosaic.fits'))[0]
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- assert hdu.data.shape == (288, 282)
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- valid = hdu.data[~np.isnan(hdu.data)]
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- assert len(valid) == 65029
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- assert_allclose(np.std(valid), 0.12661606622654725)
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- assert_allclose(np.mean(valid), 0.4994805202294361)
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- assert_allclose(np.median(valid), 0.5002447366714478)
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+ with fits.open(os.path.join(self.tmpdir, 'mosaic_bkgmatch', 'mosaic.fits')) as hdu:
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+ assert hdu[0].data.shape == (288, 282)
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+ valid = hdu[0].data[~np.isnan(hdu[0].data)]
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+ assert len(valid) == 65029
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+ assert_allclose(np.std(valid), 0.12661606622654725)
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+ assert_allclose(np.mean(valid), 0.4994805202294361)
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+ assert_allclose(np.median(valid), 0.5002447366714478)
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Author: Ole Streicher <olebole@debian.org>
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Description: Increase rtol of asserts to let the tests succeed with montage-4.0
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--- a/montage_wrapper/tests/test_wrappers.py
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+++ b/montage_wrapper/tests/test_wrappers.py
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@@ -50,9 +50,9 @@
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assert hdu.data.shape == (288, 282)
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valid = hdu.data[~np.isnan(hdu.data)]
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assert len(valid) == 65029
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- assert_allclose(np.std(valid), 0.12658458001333581)
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- assert_allclose(np.mean(valid), 0.4995945318627074)
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- assert_allclose(np.median(valid), 0.5003376603126526)
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+ assert_allclose(np.std(valid), 0.12658458001333581, 1e-5)
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+ assert_allclose(np.mean(valid), 0.4995945318627074, 1e-5)
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+ assert_allclose(np.median(valid), 0.5003376603126526, 1e-5)
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@pytest.mark.xfail() # results are not consistent on different machines
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def test_mosaic_background_match(self):
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@@ -0,0 +1,18 @@
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Author: Vincent Prat <vinceprat@free.fr>
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Description: Use ConfigParser module instead of the one embedded in distutils.config
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--- a/setup.py
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+++ b/setup.py
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@@ -21,8 +21,11 @@
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from astropy_helpers.version_helpers import generate_version_py
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# Get some values from the setup.cfg
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-from distutils import config
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-conf = config.ConfigParser()
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+try:
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+ from configparser import ConfigParser
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+except:
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+ from ConfigParser import ConfigParser
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+conf = ConfigParser()
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conf.read(['setup.cfg'])
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metadata = dict(conf.items('metadata'))
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17
dev-python/montage-wrapper/metadata.xml
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dev-python/montage-wrapper/metadata.xml
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<?xml version="1.0" encoding="UTF-8"?>
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<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
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<pkgmetadata>
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<maintainer type="project">
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<email>sci-astronomy@gentoo.org</email>
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<name>Gentoo Astronomy Project</name>
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</maintainer>
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<longdescription>
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This Astropy-affiliated package provides a python wrapper to the
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Montage Astronomical Image Mosaic Engine, including both functions to
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access individual Montage commands, and high-level functions to
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facilitate mosaicking and re-projecting.
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</longdescription>
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<upstream>
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<remote-id type="pypi">montage-wrapper</remote-id>
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</upstream>
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</pkgmetadata>
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51
dev-python/montage-wrapper/montage-wrapper-0.9.8.ebuild
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51
dev-python/montage-wrapper/montage-wrapper-0.9.8.ebuild
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# Copyright 1999-2016 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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# $Id$
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EAPI=6
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PYTHON_COMPAT=( python{2_7,3_4,3_5} )
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inherit distutils-r1
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DESCRIPTION="Python wrapper for the Montage mosaicking toolkit"
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HOMEPAGE="http://www.astropy.org/montage-wrapper/"
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SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
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LICENSE="BSD"
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SLOT="0"
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KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
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IUSE="doc test"
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RDEPEND="
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dev-python/astropy[${PYTHON_USEDEP}]
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sci-astronomy/montage"
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DEPEND="
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dev-python/astropy[${PYTHON_USEDEP}]
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dev-python/setuptools[${PYTHON_USEDEP}]
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test? ( sci-astronomy/montage )"
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PATCHES=(
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"${FILESDIR}/${P}-increase_rtol.patch"
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"${FILESDIR}/${P}-fix_tests.patch"
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"${FILESDIR}/${P}-use_configparser.patch"
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)
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python_prepare_all() {
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# use system astropy-helpers instead of bundled one
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sed -i -e '/auto_use/s/True/False/' setup.cfg || die
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distutils-r1_python_prepare_all
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}
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python_compile_all() {
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use doc && PYTHONPATH=".." emake -C docs html
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}
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python_test() {
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${EPYTHON} setup.py test
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}
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python_install_all() {
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use doc && HTML_DOCS=( docs/_build/html/. )
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distutils-r1_python_install_all
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}
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