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dev-perl/PDL: add 2.87.0
* Drop USE=threads. Tests fail to compile with USE=-threads with:
```
Basic/SourceFilter/../../blib/arch/auto/PDL/Core/Core.so: undefined symbol: pdl_pthread_free at /usr/lib64/perl5/5.38/x86_64-linux/DynaLoader.pm line 206.
```
and configure loudly warns too:
```
pthread disabled in perldl.conf
PDL will be built without POSIX thread support.
==> *NOTE*: PDL threads are unrelated to perl threads (usethreads=y)!
==> Enabling perl threads will not help!
```
Just drop it. I don't see the value in it here. See net-misc/curl's
bd4d42f83c for the general rationale in killing
USE=threads.
* Drop now-obsolete LTO filtering as it was fixed in the last release after
Eli reported it upstream, yay!
Bug: https://bugs.gentoo.org/856406
Signed-off-by: Sam James <sam@gentoo.org>
This commit is contained in:
Sam James
@@ -1 +1,2 @@
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DIST PDL-2.063.tar.gz 2813482 BLAKE2B eff1737c2d27a51b911f8dd32095bb3016cddf52a93242ddad9fad3e179cd499d84b17ef1fbed4e11bdc759823032636cc32994eea2b8c91c6adda7cb1f15ef9 SHA512 dfb776103fa98da990cc30939e218b392c7c25c8c645230a71c7e881cf5325c97f855fe46e9bc093c7517883f78457f67eee14012fa5b39790b8dfcfa1ec08c9
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DIST PDL-2.087.tar.gz 2980457 BLAKE2B 8a29b78e49bff5f682e460abf452f725b811ec0929bf8419050d62c868b51007a2d234c171b6a4435fa0c0f9e10f41e15dfc7507f9eabac7fc00f0d44a28ea36 SHA512 3c046cff3cba25d14b062041b3abc195a2995473b3e3e97428db0a06d5b9630079f7d9d12288aa1f2f95f9c562ee3079a7f17703abe947fb8bab5f0a5282e609
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140
dev-perl/PDL/PDL-2.87.0.ebuild
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140
dev-perl/PDL/PDL-2.87.0.ebuild
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# Copyright 1999-2024 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=8
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DIST_AUTHOR=ETJ
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DIST_VERSION=2.087
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DIST_EXAMPLES=( "Example/*" )
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FORTRAN_NEEDED=fortran
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inherit perl-module fortran-2
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DESCRIPTION="Perl Data Language for scientific computing"
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LICENSE="|| ( Artistic GPL-1+ ) public-domain PerlDL"
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SLOT="0"
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KEYWORDS="~amd64"
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IUSE="+badval doc fortran gd gsl hdf netpbm pdl2 pgplot test"
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RDEPEND="
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sys-libs/ncurses:=
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app-arch/sharutils
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dev-perl/Astro-FITS-Header
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dev-perl/Convert-UU
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>=virtual/perl-Data-Dumper-2.121.0
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>=dev-perl/File-Map-0.570.0
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>=virtual/perl-Filter-Simple-0.880.0
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dev-perl/Filter
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dev-perl/File-Which
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>=dev-perl/Inline-0.830.0
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>=dev-perl/Inline-C-0.620.0
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>=virtual/perl-Scalar-List-Utils-1.330.0
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virtual/perl-Math-Complex
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dev-perl/Module-Compile
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>=dev-perl/OpenGL-0.700.0
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dev-perl/OpenGL-GLUT
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>=dev-perl/TermReadKey-2.340.0
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|| ( dev-perl/Term-ReadLine-Perl dev-perl/Term-ReadLine-Gnu )
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>=virtual/perl-Data-Dumper-2.121.0
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dev-perl/Pod-Parser
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virtual/perl-File-Spec
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virtual/perl-File-Temp
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virtual/perl-Filter-Simple
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virtual/perl-Storable
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>=virtual/perl-Text-Balanced-2.50.0
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fortran? ( >=dev-perl/ExtUtils-F77-1.260.0 )
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gd? ( media-libs/gd )
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gsl? ( sci-libs/gsl )
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hdf? (
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sci-libs/hdf
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dev-perl/Alien-HDF4
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)
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netpbm? (
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media-libs/netpbm
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media-video/ffmpeg
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)
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pdl2? (
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>=dev-perl/Devel-REPL-1.3.11
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|| ( dev-perl/Term-ReadLine-Perl dev-perl/Term-ReadLine-Gnu )
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)
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pgplot? ( dev-perl/PGPLOT )
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"
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DEPEND="
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${RDEPEND}
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"
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BDEPEND="
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${RDEPEND}
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>=virtual/perl-Carp-1.200.0
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>=dev-perl/Devel-CheckLib-1.10.0
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>=dev-perl/ExtUtils-Depends-0.402.0
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>=virtual/perl-ExtUtils-MakeMaker-7.120.0
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>=virtual/perl-ExtUtils-ParseXS-3.10.0
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virtual/perl-File-Path
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fortran? ( >=dev-perl/ExtUtils-F77-1.130.0 )
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test? (
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dev-perl/Test-Exception
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dev-perl/Test-Warn
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dev-perl/Test-Deep
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)
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"
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mydoc="BUGS DEPENDENCIES DEVELOPMENT Known_problems MANIFEST* Release_Notes"
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PATCHES=(
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# Respect user choice for fortran compiler+flags, add pic
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"${FILESDIR}"/${PN}-2.87.0-fortran.patch
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)
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pkg_setup() {
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perl_set_version
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use fortran && fortran-2_pkg_setup
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}
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src_prepare() {
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perl-module_src_prepare
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find . -name Makefile.PL -exec \
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sed -i -e "s|/usr|${EPREFIX}/usr|g" {} \; || die
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}
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src_configure() {
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sed -i \
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-e '/USE_POGL/s/=>.*/=> 1,/' \
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-e "/WITH_3D/s/=>.*/=> 1,/" \
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-e "/HTML_DOCS/s/=>.*/=> $(use doc && echo 1 || echo 0),/" \
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-e "/WITH_BADVAL/s/=>.*/=> $(use badval && echo 1|| echo 0),/" \
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-e "/WITH_DEVEL_REPL/s/=>.*/=> $(use pdl2 && echo 1 || echo 0),/" \
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-e "/WITH_GSL/s/=>.*/=> $(use gsl && echo 1 || echo 0),/" \
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-e "/WITH_GD/s/=>.*/=> $(use gd && echo 1 || echo 0),/" \
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-e "/WITH_HDF/s/=>.*/=> $(use hdf && echo 1 || echo 0),/" \
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-e "/WITH_MINUIT/s/=>.*/=> $(use fortran && echo 1|| echo 0),/" \
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-e "/WITH_PGPLOT/s/=>.*/=> $(use pgplot && echo 1 || echo 0),/" \
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-e "/WITH_POSIX_THREADS/s/=>.*/=> 1,/" \
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-e "/WITH_PROJ/s/=>.*/=> $(echo 0),/" \
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-e "/WITH_SLATEC/s/=>.*/=> $(use fortran && echo 1|| echo 0),/" \
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perldl.conf || die
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perl-module_src_configure
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}
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src_test() {
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MAKEOPTS+=" -j1" perl-module_src_test
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}
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src_install() {
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perl-module_src_install
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cp Doc/scantree.pl "${D}"/${VENDOR_ARCH}/PDL/Doc || die
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}
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pkg_postinst() {
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perl "${VENDOR_ARCH}/PDL/Doc/scantree.pl" || die
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elog "Building perldl.db done. You can recreate this at any time"
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elog "by running:"
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elog "perl ${VENDOR_ARCH}/PDL/Doc/scantree.pl"
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}
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pkg_prerm() {
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rm -rf "${EROOT}"/var/lib/pdl/html
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rm -f "${EROOT}"/var/lib/pdl/{pdldoc.db,Index.pod}
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}
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26
dev-perl/PDL/files/PDL-2.87.0-fortran.patch
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26
dev-perl/PDL/files/PDL-2.87.0-fortran.patch
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@@ -0,0 +1,26 @@
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diff --git a/Libtmp/Minuit/Makefile.PL b/Libtmp/Minuit/Makefile.PL
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index bd2c933..2268225 100644
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--- a/Libtmp/Minuit/Makefile.PL
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+++ b/Libtmp/Minuit/Makefile.PL
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@@ -125,7 +125,7 @@ undef &MY::postamble; # suppress warning
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$orig .= "FFLAGS = $hack_64bit $mycflags \$(OPTIMIZE)\n";
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$orig .= join "\n",map {
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("minuitlib/$_\$(OBJ_EXT): minuitlib/$_.f
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- $mycompiler -c \$(FFLAGS) -o minuitlib/$_\$(OBJ_EXT) minuitlib/$_.f
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+ \$(FC) \$(FFLAGS) -fPIC -c -o minuitlib/$_\$(OBJ_EXT) $mycflags minuitlib/$_.f
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" )} @minuitfiles;
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return $orig;
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};
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diff --git a/Libtmp/Slatec/Makefile.PL b/Libtmp/Slatec/Makefile.PL
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index 443d53b..b4675f7 100644
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--- a/Libtmp/Slatec/Makefile.PL
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+++ b/Libtmp/Slatec/Makefile.PL
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@@ -85,7 +85,7 @@ undef &MY::postamble; # suppress warning
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$orig =~ s/:\s*slatec\.pd/: slatec.pd/;
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$orig .= "FFLAGS = $hack_64bit $mycflags \$(OPTIMIZE)\n";
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join "\n", $orig, map "$_\$(OBJ_EXT): $_.f
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- $mycompiler -c \$(FFLAGS) -o $_\$(OBJ_EXT) $_.f", @slatecfiles;
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+ \$(FC) \$(FFLAGS) -c -fPIC -o $_\$(OBJ_EXT) $mycflags $_.f", @slatecfiles;
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};
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# Remove i386 option for OS X recent versions for better build, dual arch does not work anyway
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