dev-python/scikit-image: Remove old

Signed-off-by: Michał Górny <mgorny@gentoo.org>
This commit is contained in:
Michał Górny
2024-08-17 18:23:47 +02:00
parent a92f0450b9
commit 6d419e5769
2 changed files with 0 additions and 97 deletions

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DIST scikit-image-data-15735b54e85c02427f07c71e6456723495034805.tar.bz2 143900901 BLAKE2B c1352e76337250fe1a9d6e07f08b6c9b1e0aed922ab8e0a3a4a1ea175f593b3375522e59550d30a22d392c34fef26d638c007c2af3d991887e02e7c68e56ebbb SHA512 d113dd258b35be710d841f9900cfbfe7103d1190b042489de88dd504b56277edac9a98fed5517e57725c5292fe26528267a06ff313bf6500b669d872c4481146
DIST scikit_image-0.23.2.tar.gz 22678261 BLAKE2B 11c44676e9f7bce7735e85d8416175a55b1808807b99597d60495dc2b0c961a05a514b5ec456665a25d31cc09a20e430c331cfd5bc10afa01ca4070722aa03f8 SHA512 8abf6c2bb92a75524d254265822cdc49db636a482efe0d6459fc113f6898bc5c19ad58905a5020a9c4262f55993ad2e8d13810023c62d06c5ee9854666f5337f
DIST scikit_image-0.24.0.tar.gz 22693928 BLAKE2B f165f702908fe446b459de3db0ec056a4b79d7266f85bc81c991569c1e492c22d238e8553d8f035abd83d4d3c4b449304e74b55d8bf558cac977c3ea5f0c864a SHA512 becb062725b4c1f64e12a1f775175e48dbce1b989c1e8f40ec04ff79cb926740be514b9a0a68e3f9e17fb0d3c7b860c7451b91eb178bbae93521e02e3e8e92db

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# Copyright 1999-2024 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
DISTUTILS_USE_PEP517=meson-python
DISTUTILS_EXT=1
PYTHON_COMPAT=( python3_{10..12} )
inherit distutils-r1 optfeature pypi
TEST_DATA_COMMIT=15735b54e85c02427f07c71e6456723495034805
DESCRIPTION="Image processing routines for SciPy"
HOMEPAGE="
https://scikit-image.org/
https://github.com/scikit-image/scikit-image/
https://pypi.org/project/scikit-image/
"
SRC_URI+="
test? (
https://gitlab.com/scikit-image/data/-/archive/${TEST_DATA_COMMIT}/scikit-image-data-${TEST_DATA_COMMIT}.tar.bz2
)
"
LICENSE="BSD"
SLOT="0"
KEYWORDS="~amd64 ~arm64 ~x86"
RDEPEND="
>=dev-python/imageio-2.33[${PYTHON_USEDEP}]
>=dev-python/lazy-loader-0.4[${PYTHON_USEDEP}]
>=dev-python/networkx-2.8[${PYTHON_USEDEP}]
>=dev-python/numpy-1.23[${PYTHON_USEDEP}]
>=dev-python/pillow-9.1[${PYTHON_USEDEP}]
>=dev-python/scipy-1.9[sparse(+),${PYTHON_USEDEP}]
>=dev-python/tifffile-2022.8.12[${PYTHON_USEDEP}]
"
DEPEND="${RDEPEND}"
BDEPEND="
>=dev-python/cython-3.0.4[${PYTHON_USEDEP}]
dev-python/packaging[${PYTHON_USEDEP}]
test? (
dev-python/pytest-localserver[${PYTHON_USEDEP}]
)
"
DOCS=( CONTRIBUTORS.txt RELEASE.txt )
# xdist does not work with this test suite
distutils_enable_tests pytest
# There is a programmable error in your configuration file:
#distutils_enable_sphinx doc/source dev-python/numpydoc dev-python/myst-parser
src_test() {
# for some reason, upstream refetches data that's already in the tarball
# sigh
mkdir -p "${HOME}/.cache/scikit-image" || die
mv skimage "${HOME}/.cache/scikit-image/${PV/_/}" || die
# This is a true horror, sigh
local cache_dir=${HOME}/.cache/scikit-image/${PV/_/}/data
pushd "${WORKDIR}/data-${TEST_DATA_COMMIT}" >/dev/null || die
cp Tests_besides_Equalize_Otsu/add18_entropy/rank_filters_tests_3d.npz \
Tests_besides_Equalize_Otsu/gray_morph_output.npz \
brain.tiff cells3d.tif eagle.png \
"${cache_dir}/" || die
cp Normal_Epidermis_and_Dermis_with_Intradermal_Nevus_10x.JPG "${cache_dir}"/skin.jpg || die
cp pivchallenge/B/B001_1.tif "${cache_dir}"/pivchallenge-B-B001_1.tif || die
cp pivchallenge/B/B001_2.tif "${cache_dir}"/pivchallenge-B-B001_2.tif || die
cp kidney-tissue-fluorescence.tif "${cache_dir}"/kidney.tif || die
cp lily-of-the-valley-fluorescence.tif "${cache_dir}"/lily.tif || die
cp astronaut_rl.npy "${cache_dir}/../restoration/tests/" || die
popd > /dev/null || die
distutils-r1_src_test
}
python_test() {
local EPYTEST_DESELECT=(
# tests for downloading all data files, including these not needed
# by any actual tests
data/tests/test_data.py::test_download_all_with_pooch
)
local -x PYTEST_DISABLE_PLUGIN_AUTOLOAD=1
epytest --pyargs skimage -p localserver -o xfail_strict=False
}
pkg_postinst() {
optfeature "FITS io capability" dev-python/astropy
optfeature "GTK" dev-python/pygtk
optfeature "io plugin providing most standard formats" dev-python/imread
optfeature "plotting" dev-python/matplotlib
optfeature "wavelet transformations" dev-python/pywavelets
optfeature "io plugin providing a wide variety of formats, including specialized formats using in medical imaging." dev-python/simpleitk
}