mirror of
https://github.com/gentoo-mirror/gentoo.git
synced 2026-08-06 00:48:18 -07:00
sci-mathematics/Macaulay2: Remove old
Package-Manager: Portage-2.3.16, Repoman-2.3.6
This commit is contained in:
Harri Nieminen
committed by
David Seifert
David Seifert
parent
2ec547b92e
commit
6bd6d0c17f
@@ -1,153 +0,0 @@
|
||||
# Copyright 1999-2015 Gentoo Foundation
|
||||
# Distributed under the terms of the GNU General Public License v2
|
||||
|
||||
EAPI=5
|
||||
|
||||
PYTHON_COMPAT=( python2_7 )
|
||||
|
||||
inherit autotools elisp-common eutils flag-o-matic python-single-r1 toolchain-funcs
|
||||
|
||||
FACTORY="factory-4.0.0+m4"
|
||||
FACTORY_GFTABLES="factory.4.0.1-gftables"
|
||||
|
||||
DESCRIPTION="Research tool for commutative algebra and algebraic geometry"
|
||||
HOMEPAGE="http://www.math.uiuc.edu/Macaulay2/"
|
||||
BASE_URI="http://www.math.uiuc.edu/Macaulay2/Downloads/OtherSourceCode/trunk"
|
||||
SRC_URI="
|
||||
https://dev.gentoo.org/~tomka/files/${P}.tar.bz2
|
||||
${BASE_URI}/${FACTORY}.tar.gz
|
||||
${BASE_URI}/${FACTORY_GFTABLES}.tar.gz
|
||||
${BASE_URI}/gtest-1.7.0.tar.gz"
|
||||
|
||||
SLOT="0"
|
||||
LICENSE="GPL-2"
|
||||
KEYWORDS="amd64 x86"
|
||||
IUSE="debug emacs +optimization"
|
||||
|
||||
REQUIRED_USE="${PYTHON_REQUIRED_USE}"
|
||||
|
||||
DEPEND="${PYTHON_DEPS}
|
||||
sys-process/time
|
||||
virtual/pkgconfig"
|
||||
|
||||
RDEPEND="${PYTHON_DEPS}
|
||||
sys-libs/gdbm
|
||||
<dev-libs/ntl-7
|
||||
sci-mathematics/pari[gmp]
|
||||
>=sys-libs/readline-6.1
|
||||
dev-libs/libxml2:2
|
||||
sci-mathematics/flint[gc]
|
||||
sci-mathematics/frobby
|
||||
sci-mathematics/4ti2
|
||||
sci-mathematics/nauty
|
||||
>=sci-mathematics/normaliz-2.8
|
||||
sci-mathematics/gfan
|
||||
sci-libs/mpir[cxx]
|
||||
dev-libs/mpfr
|
||||
sci-libs/cdd+
|
||||
sci-libs/cddlib
|
||||
sci-libs/lrslib[gmp]
|
||||
virtual/blas
|
||||
virtual/lapack
|
||||
dev-util/ctags
|
||||
sys-libs/ncurses
|
||||
>=dev-libs/boehm-gc-7.4[threads]
|
||||
dev-libs/libatomic_ops
|
||||
emacs? ( virtual/emacs )"
|
||||
|
||||
SITEFILE=70Macaulay2-gentoo.el
|
||||
|
||||
S="${WORKDIR}/M2/"
|
||||
|
||||
pkg_setup () {
|
||||
tc-export CC CPP CXX PKG_CONFIG
|
||||
append-cppflags "-I/usr/include/frobby"
|
||||
# gtest needs python:2
|
||||
python-single-r1_pkg_setup
|
||||
}
|
||||
|
||||
src_prepare() {
|
||||
# Patching .m2 files to look for external programs in
|
||||
# /usr/bin
|
||||
epatch "${FILESDIR}"/1.6-paths-of-external-programs.patch
|
||||
|
||||
# Shortcircuit lapack tests
|
||||
epatch "${FILESDIR}"/1.6-lapack.patch
|
||||
|
||||
# Factory is a statically linked library which (in this flavor) are not used by any
|
||||
# other program. We build it internally and don't install it.
|
||||
cp "${DISTDIR}/${FACTORY}.tar.gz" "${S}/BUILD/tarfiles/" \
|
||||
|| die "copy failed"
|
||||
cp "${DISTDIR}/${FACTORY_GFTABLES}.tar.gz" "${S}/BUILD/tarfiles/" \
|
||||
|| die "copy failed"
|
||||
# Macaulay2 developers want that gtest is built internally because
|
||||
# the documentation says it may fail if build with options not the
|
||||
# same as the tested program.
|
||||
cp "${DISTDIR}/gtest-1.7.0.tar.gz" "${S}/BUILD/tarfiles/" \
|
||||
|| die "copy failed"
|
||||
|
||||
eautoreconf
|
||||
}
|
||||
|
||||
src_configure (){
|
||||
# Recommended in bug #268064 Possibly unecessary
|
||||
# but should not hurt anybody.
|
||||
if ! use emacs; then
|
||||
tags="ctags"
|
||||
fi
|
||||
|
||||
# configure instead of econf to enable install with --prefix
|
||||
./configure LIBS="$($(tc-getPKG_CONFIG) --libs lapack)" \
|
||||
--prefix="${D}/usr" \
|
||||
--disable-encap \
|
||||
--disable-strip \
|
||||
--with-issue=Gentoo \
|
||||
$(use_enable optimization optimize) \
|
||||
$(use_enable debug) \
|
||||
--enable-build-libraries="factory" \
|
||||
--with-unbuilt-programs="4ti2 gfan normaliz nauty cddplus lrslib" \
|
||||
|| die "failed to configure Macaulay"
|
||||
}
|
||||
|
||||
src_compile() {
|
||||
# Parallel build not supported yet
|
||||
emake IgnoreExampleErrors=true -j1
|
||||
|
||||
if use emacs; then
|
||||
cd "${S}/Macaulay2/emacs" || die
|
||||
elisp-compile *.el
|
||||
fi
|
||||
}
|
||||
|
||||
src_test() {
|
||||
# No parallel tests yet & Need to increase the time
|
||||
# limit for long running tests in Schubert2 to pass
|
||||
emake TLIMIT=550 -j1 check
|
||||
}
|
||||
|
||||
src_install () {
|
||||
# Parallel install not supported yet
|
||||
emake IgnoreExampleErrors=true -j1 install
|
||||
|
||||
# Remove emacs files and install them in the
|
||||
# correct place if use emacs
|
||||
rm -rf "${ED}"/usr/share/emacs/site-lisp || die
|
||||
if use emacs; then
|
||||
cd "${S}/Macaulay2/emacs" || die
|
||||
elisp-install ${PN} *.elc *.el
|
||||
elisp-site-file-install "${FILESDIR}/${SITEFILE}"
|
||||
fi
|
||||
}
|
||||
|
||||
pkg_postinst() {
|
||||
if use emacs; then
|
||||
elisp-site-regen
|
||||
elog "If you want to set a hot key for Macaulay2 in Emacs add a line similar to"
|
||||
elog "(global-set-key [ f12 ] 'M2)"
|
||||
elog "in order to set it to F12 (or choose a different one)."
|
||||
fi
|
||||
}
|
||||
|
||||
pkg_postrm() {
|
||||
use emacs && elisp-site-regen
|
||||
}
|
||||
@@ -1,5 +1 @@
|
||||
DIST Macaulay2-1.7_pre.tar.bz2 4639477 SHA256 b14918187724f8911bc50edf87c9692209ff0c2191feb257084adc87609eb1cd SHA512 e70376d1e54b6e239ebb3bf676507a2115fdf5c4fbe05f320553029a84114b74d78f54e4d1bdc7643131f3c45c301e83c21ff99e4d4b675372e971368398d6f5 WHIRLPOOL 396311aadb8a7845deaee5aeca49c431430abc46201e935ef72c4579c9cbe6cd4da85f3e09ff0fe647031f8050fb7c62f63ecce251bf34648c1848cd00eef68e
|
||||
DIST Macaulay2-1.8.2.1-fat.tar.bz2 26102483 SHA256 11e13fbb4aeeddae1547ed01e499e3f8961446cb9bec8b3162b29cadd2f280c1 SHA512 64f7ea9b01cdb308023a55d8ab8bd6733540f25161dacf27052c071e143418c68c639d5115cf32540c11594b70eae14473f4ef6ce5bd12b6df0722da7c13dd2c WHIRLPOOL 3f9c838d6624f95076957743bf402236708cb2af15b84d24c4446fb193f7608698cc63e43eb8eff8bf878963ce2a9fd85f37128f73d1dbd43d4c0bcda980753d
|
||||
DIST factory-4.0.0+m4.tar.gz 4711126 SHA256 9b2498cc7fc6765f1c586e8061ebe236cdce4b32a44721a235ad2644ec3124fb SHA512 1dacb9aae52e655bccbbc960397b02351050791594dd9c39771f0da7f8c6e8130a8827c2a675c3fbaaa214606e123ac9776e1c73d143649353cefc50cadeea3e WHIRLPOOL 47c4d6261fc6cc9c172035d8774f0cde9fa669fa164fc4a0f47e84ba789d69d14f5a16d042451564412fdedddec71335714ad751508495c22cea25b69f10b925
|
||||
DIST factory.4.0.1-gftables.tar.gz 2974152 SHA256 9cd158ceb1c2b1c47bdca2c0b004bba92cb0e0aaa0ea6a43ca784ebdce10eebd SHA512 060c58fe6e4565dd5e7649bfa070f14dec3c383a55ebab52a9f02b58a6405e2183e0c7e08964cddb87b81e872c0d8a52d7bd4575d07269547be544cf6a725a76 WHIRLPOOL a721a6824681118578c7289cea77a3f47e5c7654f30dc454eaac76b19cc89e416ae54b8d21a69f897d7087d4b67990634fc960f81df2ea53f428868d608dc9c2
|
||||
DIST gtest-1.7.0.tar.gz 1001582 SHA256 c0f860eee47c86e0aeb462fd0bdfd70e3975297e0b8b178e0e03a95e1f6c9bc4 SHA512 a9f5c047b39efb2d11b55ee9913662ca402ac6837b3ad2d278ecfbd1caf32ed4546f169e3e92503d57bf3b62ccf89cd062da1c7ea3638aae98e868d2766363c3 WHIRLPOOL 36edbdf8be7c3793a89918a3c43d74e75a6281a37c394f7d2f20506130a76aab04a3beddba01bf7f0e9b6901c7e834ca014c31c913c0ea846d3f6be9c93599d2
|
||||
|
||||
@@ -1,50 +0,0 @@
|
||||
--- configure.ac 2012-10-24 09:29:55.240498786 -0700
|
||||
+++ configure.ac.2 2012-10-30 15:07:27.172846300 -0700
|
||||
@@ -1285,46 +1285,7 @@
|
||||
done
|
||||
test $BUILD_factory = yes && BUILTLIBS="$SINGULARLIBS $BUILTLIBS"
|
||||
|
||||
-# we need to do the fortran library testing last, in case AC_SEARCH_LIBS adds
|
||||
-# one of them to $LIBS, making it impossible to check for the presence of C or
|
||||
-# C++ libraries. (I'm not sure why putting -llapack on the gcc command line
|
||||
-# needlessly causes the library to be linked against.)
|
||||
-FORTRANUSED=no
|
||||
-if test "$LAPACK" = yes
|
||||
-then AC_MSG_CHECKING([whether the vecLib framework is available])
|
||||
- SAVELIBS=$LIBS LIBS="-framework vecLib $LIBS"
|
||||
- AC_LANG(C)
|
||||
- AC_LINK_IFELSE(
|
||||
- [AC_LANG_PROGRAM(,[sgemv_();dgetrf_();])],
|
||||
- [
|
||||
- AC_MSG_RESULT(yes)
|
||||
- ],
|
||||
- [
|
||||
- AC_MSG_RESULT(no)
|
||||
- LIBS=$SAVELIBS
|
||||
- FORTRANUSED=yes
|
||||
- if test $BUILD_lapack = no
|
||||
- then AC_LANG(Fortran)
|
||||
- if test "$FC" = ""
|
||||
- then AC_MSG_ERROR(no fortran compiler found)
|
||||
- else AC_MSG_NOTICE(using fortran compiler $FC)
|
||||
- fi
|
||||
- AC_SEARCH_LIBS(sgemv,blas f77blas,,BUILD_lapack=yes)
|
||||
- AC_SEARCH_LIBS(dgetrf,lapack,,BUILD_lapack=yes)
|
||||
- fi
|
||||
- ])
|
||||
-fi
|
||||
-test $BUILD_lapack = yes && BUILTLIBS="-llapack -lblas $BUILTLIBS"
|
||||
-
|
||||
-if test $BUILD_lapack = yes
|
||||
-then # test whether the fortran compiler can handle lapack, which, starting with
|
||||
- # version 3.2, requires fortran 90, not fortran 77
|
||||
- AC_LANG(Fortran)
|
||||
- AC_MSG_CHECKING([whether the fortran compiler is modern enough for lapack])
|
||||
- AC_COMPILE_IFELSE([instrinsic maxloc],
|
||||
- AC_MSG_ERROR(the fortran compiler ($FC) does not support the Fortran 90 language required for compiling lapack),
|
||||
- AC_MSG_RESULT(yes))
|
||||
-fi
|
||||
+BUILTLIBS="$(${PKG_CONFIG} --libs lapack) $BUILTLIBS"
|
||||
|
||||
if test $BUILD_memtailor = yes
|
||||
then BUILTLIBS="-lmemtailor $BUILTLIBS"
|
||||
Reference in New Issue
Block a user