gentoo-mirror/gentoo
1
0
Fork 0
mirror of https://github.com/gentoo-mirror/gentoo.git synced 2026-01-06 02:17:34 -08:00
Code Issues Projects Releases Wiki Activity
gentoo/sci-biology
History
Michał Górny 3f9689daa1
*/*: Use := on virtual/zlib deps, part 6 
Done via:

```
git grep -l 'virtual/zlib"' | xargs sed -i -e 's@virtual/zlib"@virtual/zlib:="@'
```

Signed-off-by: Michał Górny <mgorny@gentoo.org>
2025-11-04 11:08:49 +01:00
..
aaindex
…
abyss
…
amap
…
augustus
*/*: Add := to virtual/zlib deps, part 1
2025-11-04 10:36:27 +01:00
bamtools
sci-*/*: update for virtual/zlib
2025-11-04 09:17:06 +01:00
bcftools
*/*: Add := to virtual/zlib deps, part 1
2025-11-04 10:36:27 +01:00
bedtools
*/*: Use := on virtual/zlib deps, part 6
2025-11-04 11:08:49 +01:00
bfast
…
biogrep
…
bioperl
…
bioperl-db
…
bioperl-network
…
bioperl-run
…
biopython
…
biosql
…
blat
…
bowtie
*/*: Add := to virtual/zlib deps, part 1
2025-11-04 10:36:27 +01:00
bwa
*/*: Use := on virtual/zlib deps, part 6
2025-11-04 11:08:49 +01:00
cd-hit
…
clustal-omega
sci-biology/clustal-omega: use dot-a.eclass
2025-07-28 23:34:24 -04:00
clustalw
*/*: destable sparc
2025-09-02 20:00:14 +03:00
clustalw-mpi
…
cutg
…
dialign2
…
dialign-tx
…
elph
…
embassy
…
embassy-cbstools
…
embassy-clustalomega
…
embassy-domainatrix
…
embassy-domalign
…
embassy-domsearch
…
embassy-emnu
…
embassy-esim4
…
embassy-hmmer
…
embassy-iprscan
…
embassy-mse
…
embassy-phylipnew
…
embassy-signature
…
embassy-structure
…
embassy-topo
…
embassy-vienna
…
emboss
…
eugene
…
exonerate
…
fasta
…
fasttree
sci-biology/fasttree: Raise cmake_minimum_required to 3.31
2025-10-05 19:44:05 +02:00
fastx_toolkit
…
finchtv
…
foldingathome
*/*: Add := to virtual/zlib deps, part 1
2025-11-04 10:36:27 +01:00
glimmer
…
glimmerhmm
…
gmap
…
hmmer
sci-biology/hmmer: use dot-a.eclass
2025-08-05 15:53:32 -04:00
iedera
…
infernal
…
iqpnni
…
kalign
…
kallisto
sci-*/*: update for virtual/zlib
2025-11-04 09:17:06 +01:00
lagan
…
libgtextutils
…
mafft
…
maq
*/*: Use := on virtual/zlib deps, part 6
2025-11-04 11:08:49 +01:00
maqview
*/*: Use := on virtual/zlib deps, part 6
2025-11-04 11:08:49 +01:00
mcl
…
mosaik
…
mothur
…
mrbayes
…
mummer
…
muscle
…
newick-utils
…
pals
…
paml
…
phylip
…
phyml
…
piler
…
pilercr
…
plink
*/*: Add := to virtual/zlib deps, part 1
2025-11-04 10:36:27 +01:00
poa
…
prank
…
primer3
…
prints
…
probcons
…
prodigal
…
profphd
…
prosite
…
pysam
sci-biology/pysam: add 0.23.3
2025-08-02 13:29:31 +02:00
qrna
…
raxml
…
rebase
…
recon
…
rnaview
…
samtools
*/*: Use := on virtual/zlib deps, part 6
2025-11-04 11:08:49 +01:00
seaview
*/*: Add := to virtual/zlib deps, part 1
2025-11-04 10:36:27 +01:00
seqan
sci-*/*: update for virtual/zlib
2025-11-04 09:17:06 +01:00
sibsim4
…
sim4
…
STAR
…
stride
…
t-coffee
…
tree-puzzle
…
treeviewx
…
trf
…
trnascan-se
…
uchime
sci-biology/uchime: Fix build w/ cmake-4
2025-10-05 19:44:06 +02:00
ucsc-genome-browser
…
unafold
sci-biology/unafold: add missing Perl BDEPENDs
2025-07-05 06:09:28 +01:00
update-blastdb
…
vcftools
*/*: Add := to virtual/zlib deps, part 1
2025-11-04 10:36:27 +01:00
velvet
Move {llvm-core → llvm-runtimes}/clang-runtime
2025-09-02 16:32:22 +02:00
wise
…
yass
…
metadata.xml
…