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gentoo/sci-biology
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Agostino Sarubbo 183f5ff5e3 sci-biology/finchtv: x86 stable wrt bug #770757 
Package-Manager: Portage-3.0.13, Repoman-3.0.2
RepoMan-Options: --include-arches="x86"
Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
2021-02-26 09:09:19 +01:00
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aaindex
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abyss
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amap
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ApE
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augustus
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bamtools
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bcftools
*/*: Remove obsolete values from PYTHON_COMPAT
2021-01-31 01:06:37 +01:00
bedtools
sci-biology/bedtools: bump to 2.30.0
2021-02-23 17:49:45 +01:00
bfast
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biogrep
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biopandas
*/*: Remove obsolete values from PYTHON_COMPAT
2021-01-31 01:06:37 +01:00
bioperl
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bioperl-db
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bioperl-network
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bioperl-run
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biopython
*/*: Remove obsolete values from PYTHON_COMPAT
2021-01-31 01:06:37 +01:00
biosql
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blat
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bowtie
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bwa
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cd-hit
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clustal-omega
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clustalw
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clustalw-mpi
sci-biology/clustalw-mpi: Port to EAPI 7
2020-11-01 19:36:24 +01:00
clustalx
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consed
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cutg
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dialign2
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dialign-tx
sci-biology/dialign-tx: Fix -fno-common
2020-11-01 19:35:50 +01:00
diya
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elph
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embassy
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embassy-cbstools
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embassy-clustalomega
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embassy-domainatrix
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embassy-domalign
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embassy-domsearch
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embassy-emnu
sci-biology/embassy-emnu: Patch out -L/usr/lib for LLD
2020-11-02 23:10:59 +01:00
embassy-esim4
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embassy-hmmer
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embassy-iprscan
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embassy-mse
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embassy-phylipnew
sci-biology/embassy-phylipnew: Patch out -L/usr/lib for LLD
2020-11-01 19:36:08 +01:00
embassy-signature
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embassy-structure
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embassy-topo
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embassy-vienna
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emboss
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eugene
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exonerate
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express
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fasta
sci-biology/fasta: drop x86-macos
2021-01-06 16:08:50 +01:00
fasttree
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fastx_toolkit
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finchtv
sci-biology/finchtv: x86 stable wrt bug #770757
2021-02-26 09:09:19 +01:00
foldingathome
sci-biology/foldingathome: Remove old
2021-01-18 11:14:03 +01:00
gatk
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GBrowse
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gibbs
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glimmer
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glimmerhmm
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gmap
sci-biology/gmap: Remove old 2015.12.31.5
2020-11-01 19:36:02 +01:00
hmmer
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HTSeq
*/*: Remove obsolete values from PYTHON_COMPAT
2021-01-31 01:06:37 +01:00
iedera
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infernal
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iqpnni
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kalign
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kallisto
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lagan
sci-biology/lagan: Port to EAPI 7
2020-11-01 19:36:21 +01:00
libgtextutils
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mafft
sci-biology/mafft: drop x86-macos
2021-01-06 16:08:55 +01:00
maq
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maqview
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mcl
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mira
sci-biology/mira: drop x86-macos
2021-01-06 16:09:04 +01:00
mosaik
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mothur
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mrbayes
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mummer
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muscle
sci-biology/muscle: Port to EAPI 7
2020-10-27 22:40:04 +01:00
ncbi-tools
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newick-utils
sci-biology/newick-utils: Port to EAPI 7
2020-11-01 19:36:11 +01:00
njplot
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pals
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paml
sci-biology/paml: Remove old 4.4c-r1
2020-11-01 19:35:56 +01:00
phrap
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phred
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phylip
sci-biology/phylip: Remove old
2020-10-27 21:56:18 +01:00
phyml
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picard
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piler
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pilercr
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plink
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poa
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prank
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primer3
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prints
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probcons
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prodigal
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profphd
sci-biology/profphd: Port to EAPI 7
2020-10-27 22:40:10 +01:00
prosite
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psipred
sci-biology/psipred: Remove old
2021-01-18 11:14:04 +01:00
pysam
*/*: Remove obsolete values from PYTHON_COMPAT
2021-01-31 01:06:37 +01:00
qrna
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raxml
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rebase
sci-biology/rebase: Remove old
2021-01-18 11:14:05 +01:00
recon
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repeatmasker
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repeatmasker-libraries
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rmblast
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rnaview
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samtools
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seaview
sci-biology/seaview: Remove old 4.5.4
2020-11-01 19:36:17 +01:00
seqan
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sibsim4
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sim4
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STAR
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stride
sci-biology/stride: drop x86-macos
2021-01-06 16:09:10 +01:00
t-coffee
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transfac
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tree-puzzle
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treeviewx
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trf
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trnascan-se
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uchime
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ucsc-genome-browser
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unafold
sci-biology/unafold: Port to EAPI 7
2020-10-27 22:40:01 +01:00
update-blastdb
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vcftools
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velvet
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wgs-assembler
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wise
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yass
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metadata.xml
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