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gentoo/sci-biology
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David Seifert f5acafd1d0 sci-biology/treeviewx: slot op on x11-libs/wxGTK 
Signed-off-by: David Seifert <soap@gentoo.org>
2025-05-17 16:57:29 +02:00
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aaindex
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abyss
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amap
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augustus
sci-biology/augustus: Stabilize 3.4.0-r3 amd64, #920140
2025-04-14 16:57:55 +01:00
bamtools
sci-biology/bamtools: update EAPI 7 -> 8 for live ebuild
2025-04-24 20:11:35 +01:00
bcftools
sci-biology/bcftools: add 1.21
2025-03-21 15:58:59 +01:00
bedtools
sci-biology/bedtools: drop 2.30.0
2025-04-29 20:37:58 +01:00
bfast
sci-biology/bfast: drop 0.7.0a
2025-04-09 20:31:40 +03:00
biogrep
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bioperl
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bioperl-db
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bioperl-network
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bioperl-run
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biopython
sci-biology/biopython: add 1.85, drop 1.81-r1
2025-04-03 21:02:14 +03:00
biosql
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blat
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bowtie
sci-biology/bowtie: Remove old
2025-05-01 13:36:04 +02:00
bwa
sci-biology/bwa: note that filter-lto has been fixed upstream
2025-03-25 00:11:07 -04:00
cd-hit
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clustal-omega
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clustalw
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clustalw-mpi
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cutg
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dialign2
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dialign-tx
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elph
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embassy
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embassy-cbstools
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embassy-clustalomega
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embassy-domainatrix
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embassy-domalign
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embassy-domsearch
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embassy-emnu
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embassy-esim4
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embassy-hmmer
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embassy-iprscan
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embassy-mse
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embassy-phylipnew
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embassy-signature
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embassy-structure
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embassy-topo
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embassy-vienna
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emboss
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eugene
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exonerate
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fasta
sci-biology/fasta: implicit declaration of function ftello
2025-04-17 12:02:23 +02:00
fasttree
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fastx_toolkit
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finchtv
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foldingathome
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glimmer
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glimmerhmm
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gmap
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hmmer
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iedera
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infernal
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iqpnni
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kalign
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kallisto
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lagan
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libgtextutils
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mafft
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maq
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maqview
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mcl
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mosaik
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mothur
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mrbayes
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mummer
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muscle
sci-biology/muscle: Stabilize 5.1.0 amd64, #945576
2024-12-05 18:30:08 +00:00
newick-utils
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pals
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paml
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phylip
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phyml
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piler
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pilercr
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plink
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poa
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prank
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primer3
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prints
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probcons
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prodigal
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profphd
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prosite
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pysam
sci-biology/pysam: Remove old
2025-03-22 21:06:33 +01:00
qrna
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raxml
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rebase
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recon
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rnaview
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samtools
sci-biology/samtools: Stabilize 1.20 amd64, #920140
2025-04-14 16:57:56 +01:00
seaview
sci-biology/seaview: add binding := to fltk, soname changed
2024-12-26 12:48:34 -05:00
seqan
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sibsim4
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sim4
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STAR
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stride
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t-coffee
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tree-puzzle
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treeviewx
sci-biology/treeviewx: slot op on x11-libs/wxGTK
2025-05-17 16:57:29 +02:00
trf
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trnascan-se
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uchime
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ucsc-genome-browser
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unafold
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update-blastdb
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vcftools
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velvet
Move {sys-devel → llvm-core}/clang-runtime
2024-12-11 12:53:16 +01:00
wise
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yass
sci-biology/yass: Fix build with USE=lowmem
2025-02-24 21:25:54 +00:00
metadata.xml
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