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dev-python/h5py: Clean old versions up
This commit is contained in:
Michał Górny
@@ -1,5 +1,2 @@
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DIST h5py-2.3.1.tar.gz 1072766 SHA256 447e55d5893ca285d1185a938548a12f3f7d4af441f1a7740ac28bc3aecf85c1 SHA512 f0da1d2ac855c02fb828444d719a1b23a580adb049335f3e732ace67558a125ac8cd3b3a68ac6bf9d10aa3ab19e4672b814eb28cc8c66910750c62efb655d744 WHIRLPOOL cdd2be028d450d1566776b056550af001dd382082cce5cac9fdb8968071b9f3e9855e2c30bf12bbb800c1313343980f74c2ad3d853318585bdc6134c8af5b35c
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DIST h5py-2.4.0.tar.gz 172462 SHA256 faaeadf4b8ca14c054b7568842e0d12690de7d5d68af4ecce5d7b8fc104d8e60 SHA512 b341994899d27ceae81cdf920c44902e7db64cd3e613e2b4bcf19a6d0aea5f2fcc4acc946222a6e5d4b03d787b05e2dd2a2a55df99561f74d6e827a61f85b2c5 WHIRLPOOL 734e848437921f97b2169243993cd111d4f91578bce9980ec9d373113917185f47ea8b1d98732a61bbfc7c7ae8bc1481ddf53a6ee576705352b6d77e22263f27
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DIST h5py-2.5.0.tar.gz 684354 SHA256 9833df8a679e108b561670b245bcf9f3a827b10ccb3a5fa1341523852cfac2f6 SHA512 4a83f9ae1855a7fad90133b327d426201c8ccfd2e7fbe9f39b2d61a2eee2f3ebe2ea02cf80f3d4e1ad659f8e790c173df8cc99b87d0b7ce63d34aa88cfdc7939 WHIRLPOOL 7d7852d1d2481077a81dbf194e72da10d013c43ede4d2d6e319e1e2be0f70d7495b0964ea7787ddbd145ac774cdabc32c5b7e51fc7c9bfec429d673b12bcc10b
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DIST h5py-2.6.0.tar.gz 245539 SHA256 b2afc35430d5e4c3435c996e4f4ea2aba1ea5610e2d2f46c9cae9f785e33c435 SHA512 6f1f8bd9f56f93d950b2601f35b3ad33d648da28970874de98e5d4f4009667e2aab8774d1d570dd16169a1bedec5e58ae60fc29053292b24f9f85d86c5671ac4 WHIRLPOOL 08476fbeba889e8c100150b44c26b7c7e3ad5f6b3662efb7e777153791a0b1a176f4081f0988aacc3769753a407c9e2cf802c950c8068a9f2f4fbd4d1a89b603
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DIST h5py-2.7.0.tar.gz 256471 SHA256 79254312df2e6154c4928f5e3b22f7a2847b6e5ffb05ddc33e37b16e76d36310 SHA512 7c1e5d8b47c176521f5f62cfc4f782c09a0e003c5cbc07a673ccc3dfbe97df930b33801ef7311360892e3fad1d7d72561a8578aed9cb630d44e1a73543bb5da4 WHIRLPOOL fa38ff5d6c2a97d9eacedb0c8ccbf791ee2edb4ff652bd39a1ab102be5ec849cd45a74dd294f42fd8b2f1d943bbe1b0653afc57f6a44aed0cfc3e0b37cdc589d
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@@ -1,55 +0,0 @@
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commit 364a77403199087168786234554f459e7d985063
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Author: Lawrence Mitchell <lawrence.mitchell@imperial.ac.uk>
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Date: Tue Nov 3 14:18:48 2015 +0000
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setup: Support building with current mpi4py version
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mpi4py migrated the mpi4py.mpi_c module to mpi4py.libmpi in April 2014.
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After the release of v1.3.1 but before v2. Sniff this in setup
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configure and import MPI types from the appropriate module in h5p.pyx,
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to allow building with MPI on and modern mpi4py versions.
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diff --git a/h5py/h5p.pyx b/h5py/h5p.pyx
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index da175dd..8a1cbb0 100644
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--- a/h5py/h5p.pyx
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+++ b/h5py/h5p.pyx
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@@ -25,7 +25,11 @@ from h5py import _objects
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from ._objects import phil, with_phil
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if MPI:
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- from mpi4py.mpi_c cimport MPI_Comm, MPI_Info, MPI_Comm_dup, MPI_Info_dup, \
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+ if MPI4PY_V2:
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+ from mpi4py.libmpi cimport MPI_Comm, MPI_Info, MPI_Comm_dup, MPI_Info_dup, \
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+ MPI_Comm_free, MPI_Info_free
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+ else:
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+ from mpi4py.mpi_c cimport MPI_Comm, MPI_Info, MPI_Comm_dup, MPI_Info_dup, \
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MPI_Comm_free, MPI_Info_free
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# Initialization
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diff --git a/setup_build.py b/setup_build.py
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index ccc0f27..e49a4e8 100644
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--- a/setup_build.py
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+++ b/setup_build.py
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@@ -162,14 +162,22 @@ class h5py_build_ext(build_ext):
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# Rewrite config.pxi file if needed
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if not op.isfile(config_file) or config.rebuild_required:
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with open(config_file, 'wb') as f:
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+ if config.mpi:
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+ import mpi4py
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+ from distutils.version import StrictVersion
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+ v2 = StrictVersion(mpi4py.__version__) > StrictVersion("1.3.1")
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+ else:
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+ v2 = False
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s = """\
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# This file is automatically generated by the h5py setup script. Don't modify.
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DEF MPI = %(mpi)s
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+DEF MPI4PY_V2 = %(mpi4py_v2)s
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DEF HDF5_VERSION = %(version)s
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DEF SWMR_MIN_HDF5_VERSION = (1,9,178)
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"""
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s %= {'mpi': bool(config.mpi),
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+ 'mpi4py_v2': bool(v2),
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'version': tuple(int(x) for x in config.hdf5_version.split('.'))}
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s = s.encode('utf-8')
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f.write(s)
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@@ -1,49 +0,0 @@
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# Copyright 1999-2016 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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EAPI=5
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PYTHON_COMPAT=( python{2_7,3_4} )
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inherit distutils-r1 flag-o-matic
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DESCRIPTION="Simple Python interface to HDF5 files"
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HOMEPAGE="http://www.h5py.org/"
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SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
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LICENSE="BSD"
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SLOT="0"
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KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
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IUSE="test examples mpi"
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RDEPEND="
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sci-libs/hdf5:=[mpi=,hl(+)]
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dev-python/numpy[${PYTHON_USEDEP}]"
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DEPEND="${RDEPEND}
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dev-python/setuptools[${PYTHON_USEDEP}]
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dev-python/cython[${PYTHON_USEDEP}]
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mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )"
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pkg_setup() {
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use mpi && export CC=mpicc
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}
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python_prepare_all() {
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append-cflags -fno-strict-aliasing
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distutils-r1_python_prepare_all
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}
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python_configure() {
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esetup.py configure $(usex mpi --mpi '')
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}
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python_test() {
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esetup.py test
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}
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python_install_all() {
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DOCS=( README.rst ANN.rst )
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use examples && local EXAMPLES=( examples/. )
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distutils-r1_python_install_all
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}
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@@ -1,69 +0,0 @@
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# Copyright 1999-2016 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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EAPI=5
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PYTHON_COMPAT=( python2_7 python3_{4,5} )
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inherit distutils-r1 flag-o-matic
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DESCRIPTION="Simple Python interface to HDF5 files"
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HOMEPAGE="http://www.h5py.org/"
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SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
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LICENSE="BSD"
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SLOT="0"
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KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
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IUSE="doc test examples mpi"
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RDEPEND="
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sci-libs/hdf5:=[mpi=,hl(+)]
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dev-python/numpy[${PYTHON_USEDEP}]
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dev-python/six[${PYTHON_USEDEP}]"
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DEPEND="${RDEPEND}
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dev-python/cython[${PYTHON_USEDEP}]
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dev-python/pkgconfig[${PYTHON_USEDEP}]
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dev-python/setuptools[${PYTHON_USEDEP}]
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doc? (
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dev-python/alabaster[${PYTHON_USEDEP}]
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>=dev-python/sphinx-1.3.1[${PYTHON_USEDEP}]
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)
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mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )"
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PATCHES=(
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"${FILESDIR}"/${P}-mpi4py2.backport
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)
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pkg_setup() {
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use mpi && export CC=mpicc
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}
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python_prepare_all() {
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append-cflags -fno-strict-aliasing
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distutils-r1_python_prepare_all
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}
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python_configure() {
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esetup.py configure $(usex mpi --mpi '')
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}
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python_compile_all() {
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if use doc; then
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cd "${S}"/docs || die
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sed '/html_theme/s:default:alabaster:g' -i conf.py || die
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rm -r _build || die
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emake html
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fi
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}
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python_test() {
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esetup.py test
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}
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python_install_all() {
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DOCS=( README.rst ANN.rst )
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use doc && HTML_DOCS=( docs/_build/html/. )
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use examples && local EXAMPLES=( examples/. )
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distutils-r1_python_install_all
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}
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@@ -1,64 +0,0 @@
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# Copyright 1999-2016 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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EAPI=5
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PYTHON_COMPAT=( python2_7 python3_{4,5} )
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inherit distutils-r1 flag-o-matic
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DESCRIPTION="Simple Python interface to HDF5 files"
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HOMEPAGE="http://www.h5py.org/"
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SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
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LICENSE="BSD"
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SLOT="0"
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KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
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IUSE="doc test examples mpi"
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RDEPEND="
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sci-libs/hdf5:=[mpi=,hl(+)]
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dev-python/numpy[${PYTHON_USEDEP}]
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dev-python/six[${PYTHON_USEDEP}]"
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DEPEND="${RDEPEND}
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dev-python/cython[${PYTHON_USEDEP}]
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dev-python/pkgconfig[${PYTHON_USEDEP}]
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dev-python/setuptools[${PYTHON_USEDEP}]
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doc? (
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dev-python/alabaster[${PYTHON_USEDEP}]
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>=dev-python/sphinx-1.3.1[${PYTHON_USEDEP}]
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)
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mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )"
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pkg_setup() {
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use mpi && export CC=mpicc
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}
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python_prepare_all() {
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append-cflags -fno-strict-aliasing
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distutils-r1_python_prepare_all
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}
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python_configure() {
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esetup.py configure $(usex mpi --mpi '')
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}
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python_compile_all() {
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if use doc; then
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cd "${S}"/docs || die
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sed '/html_theme/s:default:alabaster:g' -i conf.py || die
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emake html
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fi
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}
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python_test() {
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esetup.py test
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}
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python_install_all() {
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DOCS=( README.rst ANN.rst )
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use doc && HTML_DOCS=( docs/_build/html/. )
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use examples && local EXAMPLES=( examples/. )
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distutils-r1_python_install_all
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}
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