diff --git a/dev-python/sphinx-autoapi/Manifest b/dev-python/sphinx-autoapi/Manifest
index d293cd2d6c324..54d210ca0fce0 100644
--- a/dev-python/sphinx-autoapi/Manifest
+++ b/dev-python/sphinx-autoapi/Manifest
@@ -1,2 +1 @@
-DIST sphinx-autoapi-3.1.1.gh.tar.gz 67903 BLAKE2B aec809e53b2c1080a29c49f5d9916df2e9def0c2072d99dde7ee3250a9cc7a9fc2d1e3e76ad954cfc417205c9b8994dcb7d0533f5994eb2a584d8ffa3ee3260e SHA512 c5a3db4f6e3969af8f8f2933822e577d3469c649f6976327e55c449cd6992274ee896a7ad01d5a3bfab378819bd4fe319b9f08e989214c00b4844c03c56ed2c8
 DIST sphinx-autoapi-3.1.2.gh.tar.gz 68260 BLAKE2B 31315fb298f7dae78c10f839e2738340eaf68d5497f22368c50f14309a564d1c5636015a715a9f99080a4f753416a10c63147e63dfcd53a27d7466ad422f95c4 SHA512 18e4a49e831446fa14278ffda4fec703f3b2c86654ce78fa7f4b89e5a41f1e6b19ea76cb64e7290a3125dc027a2de8aa052495a8bfd4bcc1828780f762e81957
diff --git a/dev-python/sphinx-autoapi/sphinx-autoapi-3.1.1.ebuild b/dev-python/sphinx-autoapi/sphinx-autoapi-3.1.1.ebuild
deleted file mode 100644
index e6ac209aa02a4..0000000000000
--- a/dev-python/sphinx-autoapi/sphinx-autoapi-3.1.1.ebuild
+++ /dev/null
@@ -1,50 +0,0 @@
-# Copyright 2022-2024 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-DISTUTILS_USE_PEP517=setuptools
-PYTHON_COMPAT=( python3_{10..12} )
-
-inherit distutils-r1
-
-DESCRIPTION="A new approach to API documentation in Sphinx"
-HOMEPAGE="
-	https://sphinx-autoapi.readthedocs.io/
-	https://github.com/readthedocs/sphinx-autoapi/
-	https://pypi.org/project/sphinx-autoapi/
-"
-# sdist is missing docs, as of 2.1.0
-SRC_URI="
-	https://github.com/readthedocs/sphinx-autoapi/archive/v${PV}.tar.gz
-		-> ${P}.gh.tar.gz
-"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="amd64 arm arm64 x86"
-
-RDEPEND="
-	>=dev-python/astroid-3.0.0[${PYTHON_USEDEP}]
-	dev-python/pyyaml[${PYTHON_USEDEP}]
-	>=dev-python/sphinx-6.1.0[${PYTHON_USEDEP}]
-"
-
-BDEPEND+="
-	test? ( dev-python/beautifulsoup4[${PYTHON_USEDEP}] )
-"
-
-DOCS=( README.rst CHANGELOG.rst )
-
-distutils_enable_tests pytest
-
-python_test() {
-	local EPYTEST_DESELECT=(
-		# Internet
-		tests/python/test_pyintegration.py::TestPEP695::test_integration
-		tests/python/test_pyintegration.py::TestPipeUnionModule::test_integration
-		"tests/test_integration.py::TestExtensionErrors::test_extension_setup_errors[dotnetexample"
-	)
-
-	distutils-r1_python_test
-}