diff --git a/dev-python/pydot/Manifest b/dev-python/pydot/Manifest
index a959ba89951de..da2d678bdd4f0 100644
--- a/dev-python/pydot/Manifest
+++ b/dev-python/pydot/Manifest
@@ -1,2 +1 @@
-DIST pydot-3.0.4.tar.gz 168167 BLAKE2B 9eb23d0ee2b9a0e1ff1b9677c27f190a77fd7e8d5ae04227a38a8c8eb768565b68901fd1226fcc2cafa3707b9444d8b8a13b317eb5b0166b6ba7285e745f8437 SHA512 b2f60930fba79aa1af06bba05bb570bb597a0547685d7aa8cf7ecef8af00ccf856a0749042791b22775f1a5ae56eb5022f6f7567b988f8dacf09a5337a090602
 DIST pydot-4.0.0.tar.gz 161793 BLAKE2B 22aa176c93477755db1d336cf70d54506426d5633c4b724e5ebba511502c18dcb2442748467cb48950ecd42f5edb36eec6c99858d1b16b5130aa6095470c0d84 SHA512 8840064b05f0310e748aba8d391f6335d461672ea2fc579bea48ec703b9f508bcc3bb2175c4489983c5f918f2cd5fa22bf3d22ff278adade6bc344022fdb1fcd
diff --git a/dev-python/pydot/pydot-3.0.4.ebuild b/dev-python/pydot/pydot-3.0.4.ebuild
deleted file mode 100644
index 1af0ff609a4d5..0000000000000
--- a/dev-python/pydot/pydot-3.0.4.ebuild
+++ /dev/null
@@ -1,34 +0,0 @@
-# Copyright 1999-2025 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-DISTUTILS_USE_PEP517=setuptools
-PYTHON_COMPAT=( python3_{10..13} )
-
-inherit distutils-r1 pypi
-
-DESCRIPTION="Python interface to Graphviz's Dot language"
-HOMEPAGE="
-	https://github.com/pydot/pydot/
-	https://pypi.org/project/pydot/
-"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~alpha amd64 ~arm ~arm64 ~hppa ~mips ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86 ~amd64-linux ~ppc-macos ~x64-macos"
-IUSE="test"
-RESTRICT="!test? ( test )"
-
-RDEPEND="
-	>=dev-python/pyparsing-3.0.9[${PYTHON_USEDEP}]
-	media-gfx/graphviz
-"
-BDEPEND="
-	test? (
-		dev-python/chardet[${PYTHON_USEDEP}]
-		dev-python/parameterized[${PYTHON_USEDEP}]
-	)
-"
-
-distutils_enable_tests unittest