From 721534f0d94f4a2255f01de4861fdca9bc5a6954 Mon Sep 17 00:00:00 2001 From: Repository mirror & CI Date: Thu, 24 Apr 2025 19:20:19 +0000 Subject: [PATCH] 2025-04-24 19:20:18 UTC --- .../md5-cache/app-benchmarks/nbench-2.2.3-r2 | 6 +++--- metadata/md5-cache/app-pda/pilot-link-0.12.5-r5 | 16 ++++++++++++++++ .../{xml2doc-20030510-r2 => xml2doc-20030510-r3} | 6 +++--- metadata/md5-cache/dev-cpp/prometheus-cpp-1.2.4 | 4 ++-- metadata/md5-cache/dev-ruby/json-2.10.2 | 4 ++-- .../dev-tex/{rail-1.2_p1-r1 => rail-1.2_p1-r2} | 6 +++--- metadata/md5-cache/net-wireless/bss-0.8-r3 | 13 +++++++++++++ metadata/md5-cache/sci-biology/bamtools-2.5.2-r1 | 14 ++++++++++++++ metadata/md5-cache/sci-biology/bamtools-9999 | 4 ++-- metadata/md5-cache/sci-chemistry/moldy-2.16e-r2 | 6 +++--- metadata/pkg_desc_index | 10 +++++----- metadata/timestamp.chk | 2 +- 12 files changed, 67 insertions(+), 24 deletions(-) create mode 100644 metadata/md5-cache/app-pda/pilot-link-0.12.5-r5 rename metadata/md5-cache/app-text/{xml2doc-20030510-r2 => xml2doc-20030510-r3} (79%) rename metadata/md5-cache/dev-tex/{rail-1.2_p1-r1 => rail-1.2_p1-r2} (65%) create mode 100644 metadata/md5-cache/net-wireless/bss-0.8-r3 create mode 100644 metadata/md5-cache/sci-biology/bamtools-2.5.2-r1 diff --git a/metadata/md5-cache/app-benchmarks/nbench-2.2.3-r2 b/metadata/md5-cache/app-benchmarks/nbench-2.2.3-r2 index 00707da60a1a6..987fd1fa1ed6c 100644 --- a/metadata/md5-cache/app-benchmarks/nbench-2.2.3-r2 +++ b/metadata/md5-cache/app-benchmarks/nbench-2.2.3-r2 @@ -2,10 +2,10 @@ DEFINED_PHASES=configure install prepare DESCRIPTION=Linux/Unix of release 2 of BYTE Magazine's BYTEmark benchmark EAPI=8 HOMEPAGE=http://www.tux.org/~mayer/linux/bmark.html -INHERIT=toolchain-funcs +INHERIT=flag-o-matic toolchain-funcs KEYWORDS=~alpha amd64 arm ~arm64 ~hppa ~mips ppc ppc64 ~riscv sparc x86 LICENSE=freedist SLOT=0 SRC_URI=http://www.tux.org/~mayer/linux/nbench-byte-2.2.3.tar.gz -_eclasses_=toolchain-funcs f9d71a6efe9d083aec750dd13968e169 -_md5_=d1e430ae6788635882dc5c7267ad711b +_eclasses_=toolchain-funcs f9d71a6efe9d083aec750dd13968e169 flag-o-matic e8de74bac929ba17427e740e95707d00 +_md5_=4b909defa5564f601d48421ecd5c92f7 diff --git a/metadata/md5-cache/app-pda/pilot-link-0.12.5-r5 b/metadata/md5-cache/app-pda/pilot-link-0.12.5-r5 new file mode 100644 index 0000000000000..4ab4dc22b1703 --- /dev/null +++ b/metadata/md5-cache/app-pda/pilot-link-0.12.5-r5 @@ -0,0 +1,16 @@ +BDEPEND=virtual/pkgconfig perl? ( dev-lang/perl ) sys-devel/bison sys-devel/gnuconfig >=app-portage/elt-patches-20250306 || ( >=dev-build/automake-1.17-r1:1.17 >=dev-build/automake-1.16.5:1.16 ) || ( >=dev-build/autoconf-2.72-r1:2.72 ) >=dev-build/libtool-2.4.7-r3 >=dev-lang/perl-5.38.2-r3[perl_features_debug=,perl_features_ithreads=,perl_features_quadmath=] test? ( >=virtual/perl-Test-Simple-1 ) +DEFINED_PHASES=compile configure install prepare test +DEPEND=dev-libs/popt sys-libs/ncurses:= sys-libs/readline:= virtual/libiconv bluetooth? ( net-wireless/bluez ) perl? ( dev-lang/perl:= ) png? ( media-libs/libpng:= ) usb? ( virtual/libusb:0 ) >=dev-lang/perl-5.38.2-r3[perl_features_debug=,perl_features_ithreads=,perl_features_quadmath=] +DESCRIPTION=Suite of tools for moving data between a Palm device and a desktop +EAPI=8 +HOMEPAGE=https://github.com/jichu4n/pilot-link +INHERIT=autotools flag-o-matic perl-module +IUSE=bluetooth perl png threads usb perl_features_debug perl_features_ithreads perl_features_quadmath test +KEYWORDS=~alpha ~amd64 ~arm ~hppa ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux +LICENSE=|| ( GPL-2 LGPL-2 ) +RDEPEND=dev-libs/popt sys-libs/ncurses:= sys-libs/readline:= virtual/libiconv bluetooth? ( net-wireless/bluez ) perl? ( dev-lang/perl:= ) png? ( media-libs/libpng:= ) usb? ( virtual/libusb:0 ) >=dev-lang/perl-5.38.2-r3[perl_features_debug=,perl_features_ithreads=,perl_features_quadmath=] dev-lang/perl:= +RESTRICT=test !test? ( test ) +SLOT=0 +SRC_URI=mirror://gentoo/pilot-link-0.12.5.tar.bz2 https://dev.gentoo.org/~soap/distfiles/pilot-link-0.12.5-gentoo-patchset-r2.tar.xz +_eclasses_=gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 toolchain-funcs f9d71a6efe9d083aec750dd13968e169 libtool c81bd096be5f4c82f4e8f156ef112402 autotools 35f9bf6198bb538e28dcdea5fda274f2 flag-o-matic e8de74bac929ba17427e740e95707d00 multiprocessing 1e32df7deee68372153dca65f4a7c21f perl-functions 1863acf0982afafc67797e3ce7275b4c readme.gentoo-r1 b045f3acf546393ab6b3170781875358 perl-module 25ca2ff8e7971cb7f817f0bda4be696d +_md5_=f19b28e575188a400c2da2075b3d0ad2 diff --git a/metadata/md5-cache/app-text/xml2doc-20030510-r2 b/metadata/md5-cache/app-text/xml2doc-20030510-r3 similarity index 79% rename from metadata/md5-cache/app-text/xml2doc-20030510-r2 rename to metadata/md5-cache/app-text/xml2doc-20030510-r3 index 7d4399fb0184e..bdd3576063982 100644 --- a/metadata/md5-cache/app-text/xml2doc-20030510-r2 +++ b/metadata/md5-cache/app-text/xml2doc-20030510-r3 @@ -4,11 +4,11 @@ DEPEND=dev-libs/libxml2:2 DESCRIPTION=Tool to convert simple XML to a variety of formats (pdf, html, txt, manpage) EAPI=8 HOMEPAGE=http://xml2doc.sourceforge.net -INHERIT=autotools toolchain-funcs +INHERIT=autotools flag-o-matic toolchain-funcs KEYWORDS=~alpha amd64 ~hppa ~mips ppc ppc64 sparc x86 LICENSE=GPL-2 RDEPEND=dev-libs/libxml2:2 SLOT=0 SRC_URI=https://downloads.sourceforge.net/xml2doc/xml2doc-20030510.tgz -_eclasses_=gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 toolchain-funcs f9d71a6efe9d083aec750dd13968e169 libtool c81bd096be5f4c82f4e8f156ef112402 autotools 35f9bf6198bb538e28dcdea5fda274f2 -_md5_=a76764e1b78421272a8dad76b45cbd96 +_eclasses_=gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 toolchain-funcs f9d71a6efe9d083aec750dd13968e169 libtool c81bd096be5f4c82f4e8f156ef112402 autotools 35f9bf6198bb538e28dcdea5fda274f2 flag-o-matic e8de74bac929ba17427e740e95707d00 +_md5_=0722adf890d7139e6c127b66b660d60d diff --git a/metadata/md5-cache/dev-cpp/prometheus-cpp-1.2.4 b/metadata/md5-cache/dev-cpp/prometheus-cpp-1.2.4 index a8965a1a39a26..49ec561ba4396 100644 --- a/metadata/md5-cache/dev-cpp/prometheus-cpp-1.2.4 +++ b/metadata/md5-cache/dev-cpp/prometheus-cpp-1.2.4 @@ -6,11 +6,11 @@ EAPI=8 HOMEPAGE=https://github.com/jupp0r/prometheus-cpp INHERIT=cmake IUSE=test zlib -KEYWORDS=~amd64 ~riscv x86 +KEYWORDS=amd64 ~riscv x86 LICENSE=MIT RDEPEND=net-misc/curl sys-libs/zlib www-servers/civetweb[cxx] RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/jupp0r/prometheus-cpp/archive/v1.2.4.tar.gz -> prometheus-cpp-1.2.4.tar.gz _eclasses_=toolchain-funcs f9d71a6efe9d083aec750dd13968e169 flag-o-matic e8de74bac929ba17427e740e95707d00 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 cmake b05c1b7b3c9213c155f128f4eadaa49f -_md5_=f6844fafbd7ce9d774274916c013f6a0 +_md5_=36e4417c17892c5432068197c21dac52 diff --git a/metadata/md5-cache/dev-ruby/json-2.10.2 b/metadata/md5-cache/dev-ruby/json-2.10.2 index 044a656e754b0..0ded3c6c3f4fc 100644 --- a/metadata/md5-cache/dev-ruby/json-2.10.2 +++ b/metadata/md5-cache/dev-ruby/json-2.10.2 @@ -6,7 +6,7 @@ EAPI=8 HOMEPAGE=https://github.com/ruby/json INHERIT=ruby-fakegem IUSE=doc test ruby_targets_ruby32 ruby_targets_ruby33 ruby_targets_ruby34 doc test test -KEYWORDS=~alpha ~amd64 ~arm ~arm64 ~hppa ~loong ~mips ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86 ~amd64-linux ~x86-linux ~arm64-macos ~ppc-macos ~x64-macos ~x64-solaris +KEYWORDS=~alpha amd64 arm ~arm64 ~hppa ~loong ~mips ~ppc ~ppc64 ~riscv ~s390 ~sparc x86 ~amd64-linux ~x86-linux ~arm64-macos ~ppc-macos ~x64-macos ~x64-solaris LICENSE=|| ( BSD-2 Ruby ) RDEPEND=ruby_targets_ruby32? ( dev-lang/ruby:3.2 ) ruby_targets_ruby33? ( dev-lang/ruby:3.3 ) ruby_targets_ruby34? ( dev-lang/ruby:3.4 ) ruby_targets_ruby32? ( virtual/rubygems[ruby_targets_ruby32(-)] ) ruby_targets_ruby33? ( virtual/rubygems[ruby_targets_ruby33(-)] ) ruby_targets_ruby34? ( virtual/rubygems[ruby_targets_ruby34(-)] ) REQUIRED_USE=|| ( ruby_targets_ruby32 ruby_targets_ruby33 ruby_targets_ruby34 ) @@ -14,4 +14,4 @@ RESTRICT=!test? ( test ) !test? ( test ) SLOT=2 SRC_URI=https://github.com/ruby/json/archive/v2.10.2.tar.gz -> json-2.10.2.tar.gz _eclasses_=toolchain-funcs f9d71a6efe9d083aec750dd13968e169 flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 ruby-utils cb2cdbbce7fae7a6b2b1021219b0680d ruby-ng 960d5adaf301da1ef0ab9bdba5018a6d ruby-fakegem 92ad9217e94825cb9c8ad831b513a7ec -_md5_=2258656e67eee6260c5828ac94018c97 +_md5_=b177eefb97ed09346dd232e2ab98726a diff --git a/metadata/md5-cache/dev-tex/rail-1.2_p1-r1 b/metadata/md5-cache/dev-tex/rail-1.2_p1-r2 similarity index 65% rename from metadata/md5-cache/dev-tex/rail-1.2_p1-r1 rename to metadata/md5-cache/dev-tex/rail-1.2_p1-r2 index b099db1e3a53f..6e9a6580ea646 100644 --- a/metadata/md5-cache/dev-tex/rail-1.2_p1-r1 +++ b/metadata/md5-cache/dev-tex/rail-1.2_p1-r2 @@ -1,7 +1,7 @@ BDEPEND=app-arch/unzip app-alternatives/yacc app-alternatives/lex virtual/latex-base >=sys-apps/texinfo-4.2-r5 DEFINED_PHASES=compile install postinst postrm DESCRIPTION=Offers syntax/railroad diagrams -EAPI=7 +EAPI=8 HOMEPAGE=https://www.ctan.org/tex-archive/support/rail/ INHERIT=latex-package toolchain-funcs KEYWORDS=~amd64 ~x86 @@ -9,5 +9,5 @@ LICENSE=public-domain RDEPEND=virtual/latex-base SLOT=0 SRC_URI=https://mirror.ctan.org/support/rail.zip -> rail-1.2_p1.zip -_eclasses_=eapi8-dosym 5ac4857ad078256d939c44f7c64197a9 edo 367e103a74bf77e6a8da7894d999fa3c latex-package f6529cd874a632d3343b4d264a70a0bc toolchain-funcs f9d71a6efe9d083aec750dd13968e169 -_md5_=0d1608fe780d88569742b18fc76eaf6d +_eclasses_=edo 367e103a74bf77e6a8da7894d999fa3c latex-package f6529cd874a632d3343b4d264a70a0bc toolchain-funcs f9d71a6efe9d083aec750dd13968e169 +_md5_=1e248c80be67ab5f72babc0fb3f9ecf3 diff --git a/metadata/md5-cache/net-wireless/bss-0.8-r3 b/metadata/md5-cache/net-wireless/bss-0.8-r3 new file mode 100644 index 0000000000000..a0d1703f1c094 --- /dev/null +++ b/metadata/md5-cache/net-wireless/bss-0.8-r3 @@ -0,0 +1,13 @@ +DEFINED_PHASES=configure install +DEPEND=net-wireless/bluez +DESCRIPTION=Bluetooth stack smasher / fuzzer +EAPI=8 +HOMEPAGE=http://securitech.homeunix.org/blue/ +INHERIT=toolchain-funcs +KEYWORDS=~amd64 ~ppc ~x86 +LICENSE=GPL-2 +RDEPEND=net-wireless/bluez +SLOT=0 +SRC_URI=http://securitech.homeunix.org/blue/bss-0.8.tar.gz +_eclasses_=toolchain-funcs f9d71a6efe9d083aec750dd13968e169 +_md5_=3831151ce5c22c2f2c0732d1db0be6f2 diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2-r1 b/metadata/md5-cache/sci-biology/bamtools-2.5.2-r1 new file mode 100644 index 0000000000000..38a0f5cd808c5 --- /dev/null +++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2-r1 @@ -0,0 +1,14 @@ +BDEPEND=virtual/pkgconfig app-alternatives/ninja >=dev-build/cmake-3.20.5 +DEFINED_PHASES=compile configure install prepare test +DEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= +DESCRIPTION=A programmer's API and an end-user's toolkit for handling BAM files +EAPI=8 +HOMEPAGE=https://github.com/pezmaster31/bamtools +INHERIT=cmake +KEYWORDS=~amd64 ~x86 +LICENSE=MIT +RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= +SLOT=0/2.5.2 +SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz +_eclasses_=toolchain-funcs f9d71a6efe9d083aec750dd13968e169 flag-o-matic e8de74bac929ba17427e740e95707d00 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 cmake b05c1b7b3c9213c155f128f4eadaa49f +_md5_=21337cccf774dd1e59c91ac8776154e4 diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index bd9261d781721..cea7a4785ede6 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -2,7 +2,7 @@ BDEPEND=virtual/pkgconfig app-alternatives/ninja >=dev-build/cmake-3.20.5 >=dev- DEFINED_PHASES=compile configure install prepare test unpack DEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= DESCRIPTION=A programmer's API and an end-user's toolkit for handling BAM files -EAPI=7 +EAPI=8 HOMEPAGE=https://github.com/pezmaster31/bamtools INHERIT=cmake git-r3 LICENSE=MIT @@ -10,4 +10,4 @@ PROPERTIES=live RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 _eclasses_=toolchain-funcs f9d71a6efe9d083aec750dd13968e169 flag-o-matic e8de74bac929ba17427e740e95707d00 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 cmake b05c1b7b3c9213c155f128f4eadaa49f git-r3 875eb471682d3e1f18da124be97dcc81 -_md5_=a2299dc6ca850c1c25582656d7586681 +_md5_=bce339b7ff7a380088e00991f58c7d0c diff --git a/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2 b/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2 index fa82e2016539b..dbf2a8f732d88 100644 --- a/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2 +++ b/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2 @@ -3,11 +3,11 @@ DEFINED_PHASES=compile configure install prepare DESCRIPTION=Molecular dynamics simulations platform EAPI=7 HOMEPAGE=http://www.ccp5.ac.uk/moldy/moldy.html -INHERIT=toolchain-funcs +INHERIT=flag-o-matic toolchain-funcs IUSE=doc KEYWORDS=amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos LICENSE=GPL-2 SLOT=0 SRC_URI=ftp://ftp.earth.ox.ac.uk/pub/keith/moldy-2.16e.tar.gz -_eclasses_=toolchain-funcs f9d71a6efe9d083aec750dd13968e169 -_md5_=e9e40f56e24c1ccce0db04513b4fee54 +_eclasses_=toolchain-funcs f9d71a6efe9d083aec750dd13968e169 flag-o-matic e8de74bac929ba17427e740e95707d00 +_md5_=76231cffc439ad3cdedda3df7c1d292c diff --git a/metadata/pkg_desc_index b/metadata/pkg_desc_index index 55520de9d06f8..d71eec5cdfe26 100644 --- a/metadata/pkg_desc_index +++ b/metadata/pkg_desc_index @@ -3018,7 +3018,7 @@ app-pda/libimobiledevice 1.3.0_p20240201: Support library to communicate with Ap app-pda/libimobiledevice-glue 1.3.0 1.3.1: Support library for libimobiledevice projects app-pda/libplist 2.6.0: Support library to deal with Apple Property Lists (Binary & XML) app-pda/libusbmuxd 2.1.0: USB multiplex daemon for use with Apple iPhone/iPod Touch devices -app-pda/pilot-link 0.12.5-r4: Suite of tools for moving data between a Palm device and a desktop +app-pda/pilot-link 0.12.5-r4 0.12.5-r5: Suite of tools for moving data between a Palm device and a desktop app-pda/usbmuxd 1.1.1_p20231011 1.1.1_p20240915: USB multiplex daemon for use with Apple iPhone/iPod Touch devices app-portage/cfg-update 1.8.9-r2: Easy to use GUI & CLI alternative for etc-update app-portage/command-not-found 0.0.7: Command-not-found handler for Gentoo @@ -3419,7 +3419,7 @@ app-text/xiphos 4.2.1-r2: A Gtk+-based Bible-study frontend for SWORD app-text/xlhtml 0.5.1_p6: Convert MS Excel and Powerpoint files to HTML app-text/xlsx2csv 0.8.4: Convert MS Office xlsx files to CSV app-text/xml2 0.5: These tools are used to convert XML and HTML to and from a line-oriented format -app-text/xml2doc 20030510-r2: Tool to convert simple XML to a variety of formats (pdf, html, txt, manpage) +app-text/xml2doc 20030510-r3: Tool to convert simple XML to a variety of formats (pdf, html, txt, manpage) app-text/xml2rfc 3.18.0 3.23.2 3.24.0 3.26.0: Generates RFCs and IETF drafts from document source in XML app-text/xmldiff 2.6.3: A tool that figures out the differences between two similar XML files app-text/xmlformat 1.04: Reformat XML documents to your custom style @@ -10592,7 +10592,7 @@ dev-tex/pdfannotextractor 0.2-r3: Extract annotations from pdf files dev-tex/pgf 3.1.9a 3.1.10-r1: The TeX Portable Graphic Format dev-tex/pscyr 0.4d_beta9: Type1 cyrillic fonts collection dev-tex/pythontex 0.18: Fast Access to Python from within LaTeX -dev-tex/rail 1.2_p1-r1: Offers syntax/railroad diagrams +dev-tex/rail 1.2_p1-r2: Offers syntax/railroad diagrams dev-tex/rubber 1.6.6 1.6.7 9999: A LaTeX wrapper for automatically building documents dev-tex/serienbrief 0.2.5: Easy creation of form letters written in LaTeX dev-tex/sketch 0.3.7: Produces drawings of two- or three-dimensional solid objects and scenes for TeX @@ -15616,7 +15616,7 @@ net-wireless/blueman 2.4.4 9999: Simple and intuitive GTK+ Bluetooth Manager net-wireless/bluez 5.79 5.82: Bluetooth Tools and System Daemons for Linux net-wireless/bluez-tools 0_p20201025: A set of tools to manage bluetooth devices for linux net-wireless/broadcom-sta 6.30.223.271-r8: Broadcom's IEEE 802.11a/b/g/n hybrid Linux device driver -net-wireless/bss 0.8-r2: Bluetooth stack smasher / fuzzer +net-wireless/bss 0.8-r2 0.8-r3: Bluetooth stack smasher / fuzzer net-wireless/crackle 0.1-r1: Crackle cracks BLE Encryption (AKA Bluetooth Smart) net-wireless/dump1090 10.0.1 9999: Simple Mode S decoder for RTLSDR devices net-wireless/gnome-bluetooth 46.2 47.1: Bluetooth graphical utilities integrated with GNOME @@ -15742,7 +15742,7 @@ sci-biology/aaindex 9.1-r2: Amino acid indices and similarity matrices sci-biology/abyss 2.3.4: Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler sci-biology/amap 2.2-r6: Protein multiple-alignment-based sequence annealing sci-biology/augustus 2.5.5 3.4.0-r3 3.5.0: Eukaryotic gene predictor -sci-biology/bamtools 2.5.2 9999: A programmer's API and an end-user's toolkit for handling BAM files +sci-biology/bamtools 2.5.2 2.5.2-r1 9999: A programmer's API and an end-user's toolkit for handling BAM files sci-biology/bcftools 1.19 1.20 1.21: Utilities for variant calling and manipulating VCF and BCF files sci-biology/bedtools 2.30.0 2.31.1: Tools for manipulation and analysis of BED, GFF/GTF, VCF, SAM/BAM file formats sci-biology/bfast 0.7.0a-r1: Blat-like Fast Accurate Search Tool diff --git a/metadata/timestamp.chk b/metadata/timestamp.chk index 5d3cc0f201bb9..35b9cfbb18a10 100644 --- a/metadata/timestamp.chk +++ b/metadata/timestamp.chk @@ -1 +1 @@ -Thu, 24 Apr 2025 19:05:26 +0000 +Thu, 24 Apr 2025 19:20:18 +0000